Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211983g00001 ATGGGTTGCTGCCAGTCATCGTTGATGCTGAGAGTGAGAGAGGGAGGAGAAGCTCACCCTCACCCTGACAAGAAAGAGAAAGAGAAAGAGAAGGAGAAGGAGAAGGAAAACCACAAGGATCAAGCCCCCTACCTCCGCAACCACCACAAGGAGTCCCTCCAAGTCGCAGTGGCTGCTGACACCTGGTGGCTCTCCTTCTCCGAGTTCTCGCTGGCCGAGCTGAAGGCCGCCACCGACAATTTCAGCTCCGAATTCATAGTGTCGGAGAGCGGGGACAAGGCCCCTAACTTGGTCTACAAGGGGCGCCTCCGCGACCACTGGATTGCCGTCAAGAAGTTCCCCAAGGCCGCCTGGCCCGATCCCAAGCAGTTCGTGGACGAGGCATCCGGCGTGGGCAACCTCCGCCACCCCCGCCTCGCCAATCTGATCGGCTACTGCTGCGACGCTGACCACCGGCTCCTGGTGGCCCAGTACATGCCCAACGACACTCTGGCAAAGCACCTCTTCCACTGGGAGAATCAGACGATTGAGTGGGCCATGCGGTTGAGAGTGGCCCATTATATCGCCCAAGCTTTGAATTATTGCAGCTCTGAGGGCCGTCCCTTGTACCATGATTTGAATGCTTACCGTGTTCTTTTCGACGAGGAAGGTGATCCCCGCCTCTCCTGTTTTGGCTTGATCAAGAACAGCAGGGATGGCAAAAGTTACAGCACAAATCTTGCTTACACTCCTCCTGAATATTTAAGAAATGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGGACCGTTCTCCTAGATCTGCTTAGCGGCAAGCACATCCCTCCAAGTCAAGCACTAGATATGATACAGGGGAGCGACCTGATACAAAGGATTTGGTTACAACACTTGCTTCACTGCATACAAAACCTGATGTTCATTCCCACATTATGCTTGGAATTCCAAAACAAGAGGAAGCTCCATCAACCCCACAANNNNNNNNNNTGTTCTAGAATGGACCTAACTGCAATCCATCAGATCTTGGTTGCAACACACTACAGAGACGATGAGGGAACCAATGAGTTATCATTCCAAGAGTGGACCCAACAGATGAGAGACATGCTGGAGGCGAGGAAGCGTGGAGACTGTGCATTTCGTGACAAGGATTTTAAGACAGCCGTTGATAACTATTCCCAGTTTATTGATGTGGGAACGATGGTCTCCCCAACTGTATTTGCACGGCGCAGTCTGTGCTATCTTTTATGTGATCAGCCAGACCCTGCACTCAGAGATGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCGACGGCTTTCTACATGCAATCGGTCGCCCTTGCAAAGTTGGACATGCAGAAGGATGCCACGGATATGCTAAATGAGGCTGCTGCACTGGAAGAGAAGAGGCAAAGGGGAGGGAGAGGATCGTAG 1434 0.5188 MGCCQSSLMLRVREGGEAHPHPDKKEKEKEKEKEKENHKDQAPYLRNHHKESLQVAVAADTWWLSFSEFSLAELKAATDNFSSEFIVSESGDKAPNLVYKGRLRDHWIAVKKFPKAAWPDPKQFVDEASGVGNLRHPRLANLIGYCCDADHRLLVAQYMPNDTLAKHLFHWENQTIEWAMRLRVAHYIAQALNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSQALDMIQGSDLIQRIWLQHLLHCIQNLMFIPTLCLEFQNKRKLHQPHXXXXCSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDCAFRDKDFKTAVDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDATDMLNEAAALEEKRQRGGRGS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211983g00001 477 SUPERFAMILY TPR-like 369 470 IPR011990 GO:0005515
Stsc211983g00001 477 FunFam probable serine/threonine-protein kinase At4g35230 366 475 - -
Stsc211983g00001 477 Gene3D Phosphorylase Kinase; domain 1 58 158 - -
Stsc211983g00001 477 MobiDBLite consensus disorder prediction 14 47 - -
Stsc211983g00001 477 SUPERFAMILY Protein kinase-like (PK-like) 64 316 IPR011009 -
Stsc211983g00001 477 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 288 IPR045845 GO:0004672|GO:0009742
Stsc211983g00001 477 MobiDBLite consensus disorder prediction 1 47 - -
Stsc211983g00001 477 Pfam Protein tyrosine and serine/threonine kinase 100 317 IPR001245 GO:0004672|GO:0006468
Stsc211983g00001 477 Gene3D Tetratricopeptide repeat domain 366 474 IPR011990 GO:0005515
Stsc211983g00001 477 Gene3D Transferase(Phosphotransferase) domain 1 160 334 - -
Stsc211983g00001 477 Coils Coil 449 469 - -
Stsc211983g00001 477 FunFam probable serine/threonine-protein kinase At4g35230 57 158 - -
Stsc211983g00001 477 ProSiteProfiles Protein kinase domain profile. 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211983g00001 Stsc-Chr211983 1516 6516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211983g00001 13 275 Glycoside Hydrolase AT3G07070 33.692 1.59e-34 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Stsc211983g00001 PK_Tyr_Ser-Thr 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211983g00001 K14500 - gmx:100808907 710.679