Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211981g00001 ATGGCCTCCCCCGCCGAAGTTCCCTCTCCTGATGCCGCACCCGCACCATCTCCTCCTCCTCCTCCCCCGCCGCCGACGACTCGGCCCTCACCGTTCCCCGGACGGGAAGACTGCTGGACGGAAGAGGCCACCTCCACCCTCATCGACGCATGGGGTTCCCGCTACCTCTCCCTCAGCCGCGGTAACCTCCGCCAAAATCACTGGCAGGAAGTCGCCGCCGCCGTCAACGCCGCCCACGGTCACGACCCGAGACACCGCCGCACCGATGTCCAGTGCAAGAACCGCATCGACACCCTCAAAAAGAAATACAAGGTCGAGAGGGCTAGGGTTTCCGAATCCACCGCCGGCGAGGACGACGGCAGCGGTAGCGTCTACTCCGGCACATGGCCTTTCTTCCACCGCATCGATTCCCTCATCGGAGACACTTATCCTTTGAAAAAACAGTCCCCGCCGGTGAAATCCTCCCCTCGCCTTAAATCCCCTCCGGCGGCGAAGCCTTCTCCGCCGCCGTGGACGGTTACTCCGGTAGGTCCCCGATCCGGAACCAAGAAGCGGCCGGCGCCGATGAGGTCCGATGAGTCTTACTTTCGGCGGAAGTTCTCGGCTTTTGCAGCCGCGGCGGTGGCGGCGGCTGCGGCGGAAAGCGAGGATTCAAAGGGGAGCAGTGAGAAGAGGAGAAGGGTAACGAAAAACGATGAAGAATGGGAAATTGGGTACAGAGAATTGGCACATGCTATTGAGAAAATTGGTGAGATTTACGAGAGAGTTGAAGCGGCGAAGAGGAAGCAAATGGTTGAGTTGGAGAAGCAAAGGATGCAGTTTGCTAAGGATTTGGAGTGTCAGAGGTTGAAGCTTTTCATGGAGACTCAGCTTCACATTCACAAGATCAATAATCACTCTTCTAACGATGCTGCTGATAGTTTCTCATAG 930 0.5785 MASPAEVPSPDAAPAPSPPPPPPPPTTRPSPFPGREDCWTEEATSTLIDAWGSRYLSLSRGNLRQNHWQEVAAAVNAAHGHDPRHRRTDVQCKNRIDTLKKKYKVERARVSESTAGEDDGSGSVYSGTWPFFHRIDSLIGDTYPLKKQSPPVKSSPRLKSPPAAKPSPPPWTVTPVGPRSGTKKRPAPMRSDESYFRRKFSAFAAAAVAAAAAESEDSKGSSEKRRRVTKNDEEWEIGYRELAHAIEKIGEIYERVEAAKRKQMVELEKQRMQFAKDLECQRLKLFMETQLHIHKINNHSSNDAADSFS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211981g00001 309 MobiDBLite consensus disorder prediction 1 37 - -
Stsc211981g00001 309 Gene3D - 39 105 - -
Stsc211981g00001 309 MobiDBLite consensus disorder prediction 212 231 - -
Stsc211981g00001 309 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 19 300 IPR044823 -
Stsc211981g00001 309 MobiDBLite consensus disorder prediction 9 31 - -
Stsc211981g00001 309 MobiDBLite consensus disorder prediction 155 175 - -
Stsc211981g00001 309 Pfam Myb/SANT-like DNA-binding domain 36 138 IPR044822 -
Stsc211981g00001 309 FunFam trihelix transcription factor ASIL2 39 105 - -
Stsc211981g00001 309 MobiDBLite consensus disorder prediction 217 231 - -
Stsc211981g00001 309 MobiDBLite consensus disorder prediction 143 191 - -
Stsc211981g00001 309 PRINTS Proline rich extensin signature 157 182 - -
Stsc211981g00001 309 PRINTS Proline rich extensin signature 2 14 - -
Stsc211981g00001 309 PRINTS Proline rich extensin signature 17 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211981g00001 Stsc-Chr211981 4703 7609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211981g00001 239 303 Trihelix Transcription Factor Family AT3G14180 45.833 2.98e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc211981g00001 Myb_DNA-bind_4 2.7e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211981g00001 - - gmx:100811154 327.405