Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211973g00003 ATGGGAGGAGCAGCCACTGTGGTTTGCTTACAACAACTGAAATCAATTCTTGGTCTTGAACATTTCACTCACAATGCTGATATCATCTCAGTTATGCGCTCTGTTTTTTCCCAAACTCACAAGTGGAGATGGGAGAGCGCAGTGTTAGGATTTACCTTCATTTTCTTCCTCCTTCTCACAAGACATTTTAGCAAAAGAAAACCAAAGTTCTTTTGGGTATCAGCAATGGCACCGTTAACGTCCGTTATATTGGGAAGCTTTCTCGTTTATTTCACTCACGCTGAGAACCACGGCGTTCAAGTGATAGGAGAATTGAAGAAAGGGCTGAATCCAGCATCAGTGACAGATTTGGTGTTTGTGGCACCACACATGAGCACAGCAATAAAAACAGGGATTCTTGTTGGAATCATAGCACTTGCAGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTTAAGAATTACCACATTGATGGCAACAAAGAGATGATAGCCATTGGCACCATGAACATTCTTGGTTCTTTCACTTCTTGCTACCTCACTACAGGCCCATTCTCTCGTTCAGCTGTCAATTACAATGCTGGTTGCAAGACAGCAGTATCAAACATAGTCATGTCCATTGCAGTGATGCTAACGTTGTTGTTCTTGACACCTTTGTTCCATTACACTCCCCTTGTGGTCTTAGCAGCCATTATTGTCTCTGCAATGCTTGGTCTCATTGATTATGAAGCTGCCATTCATCTTTGGAAGATTGACAAGTTTGACTTTGTTATTTGCATGAGTGCATACATTGGTGTCGTTTTTGGTAGCGTTGAAATTGGCCTTGTCATTGCGGTTGCTTTATCTGTGCTTAGGATACTTCTATTTGTTGCAAGGCCAAGGACATTTGTTTTAGGGAACATTCCAAATTCTGGTATATACAGAAATGTTGAGCAATACCAAAATGCAAATCATGTTCCTGGGATCCTAATTCTAGAGATTGATGCACCCATTTACTTTGCCAATTCAAGCTATTTAAGAGAGAGGATCACAAGGTGGATTGATGATGAGGAAGATAGAATCAAAGCTAATGGGGAGACAAGTTTGCAGTATATCATATTGGATATGAGTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAACAAGATTGCAGACAGAAGAGGGCTACAACTTGTTATGGTCAACCCTGGAAGTGAGGTGATGAAGAAACTCAACAAATCAAAGTTCCAAGAAAACATTGGTGAAAAATGGATATATTTGACAGTTGAAGAAGCTGTTGGAGCATGCAACTTCATGTTACATACATGCAAACAAAATTCCAAGAGAGATGAATCTTGGAACAAAGTCTGA 1368 0.4042 MGGAATVVCLQQLKSILGLEHFTHNADIISVMRSVFSQTHKWRWESAVLGFTFIFFLLLTRHFSKRKPKFFWVSAMAPLTSVILGSFLVYFTHAENHGVQVIGELKKGLNPASVTDLVFVAPHMSTAIKTGILVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNILGSFTSCYLTTGPFSRSAVNYNAGCKTAVSNIVMSIAVMLTLLFLTPLFHYTPLVVLAAIIVSAMLGLIDYEAAIHLWKIDKFDFVICMSAYIGVVFGSVEIGLVIAVALSVLRILLFVARPRTFVLGNIPNSGIYRNVEQYQNANHVPGILILEIDAPIYFANSSYLRERITRWIDDEEDRIKANGETSLQYIILDMSAVGNIDTSGISMLEEVNKIADRRGLQLVMVNPGSEVMKKLNKSKFQENIGEKWIYLTVEEAVGACNFMLHTCKQNSKRDESWNKV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211973g00003 455 Pfam STAS domain 313 431 IPR002645 -
Stsc211973g00003 455 Gene3D STAS domain 292 437 IPR036513 -
Stsc211973g00003 455 ProSiteProfiles STAS domain profile. 312 435 IPR002645 -
Stsc211973g00003 455 Pfam Sulfate permease family 1 261 IPR011547 GO:0016020
Stsc211973g00003 455 PANTHER SULFATE TRANSPORTER 1 443 IPR001902 GO:0016020|GO:0055085
Stsc211973g00003 455 FunFam Sulfate transporter 31 292 438 - -
Stsc211973g00003 455 NCBIfam sulfate permease 1 431 IPR001902 GO:0016020|GO:0055085
Stsc211973g00003 455 SUPERFAMILY SpoIIaa-like 317 435 IPR036513 -
Stsc211973g00003 455 CDD STAS_SulP_like_sulfate_transporter 313 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211973g00003 Stsc-Chr211973 34495 37929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211973g00003 1 450 Inorganic Solute Cotransporters AT4G02700 69.111 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211973g00003 K17471 - gmx:100791091 785.023