Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211958g00001 ATGGAGGCTTCATGGGAACAAAGTGTCACAAATTCTATCAACACAATCTATCTTCTCTTCTCTGCCTACCATGTCTTTGTAATGCAAATTGGCTTTGCAATGATATCTGCTGGATCCGTACGTGCCAAGAATGCTATGAACATAATGCTAATCAATGTGGTTGATGCTGTGGTTGGTAGCATCTCATTCTACCTCTTTGGATTTGCATTTGCATATGGAGATTCAAACCCTTTCATTGGAACTAATTTGTTTGCTTTGGCCAACATTCCAAATCGCACATATGATTATAGTTTCTTCCTTTATCAATGGGCTTTTGCTATAGCTGTGGCAGGGATCACAATTGTGGTCCATTGGGTTTGGTCATCCAGTGGTTGGCTAAGTGCAAGTTCAAGTGAGCCGTTCTTGGGCTCAGGGGCTATTGACTTTGCTGGGAGTGGAGTGGTCCATTTGGTTGGTGCAATTGCGGGCCATTGGGGATCCATCATAGAAGGGCCGCGCGTTGGCCAATTTGATGCTTTTGGCAAGCCGATCCCTCTTCGAGGCCATAATGCAACTCTTGTGGTACTCGGAACGTTCTTGTTGTGGTTTGGTTGGTTCGAGTTTAATCCTGGCTCATTTGATAAGATCGTTGTTGCCTACTCTAGCTCGTCTGATCAAGGTAATTGGACTTCGGTGGGTCGAATTGCTGTCGTCACCACATTGGCTGGATCAACGGCTAGCATTGTCACCTTGTTCGGCCAACGACTATTGATTGGTCACTGGGACACAATGGATGTGTGCAATGGGTTGCTTGGTGGGTTTGTTGCCATTACATCTGGATGCTCAGTTGTGGAGCCATGGGCTGCCATTATTTGTGGGTTCGTCTCGGCTTGGATCTTAATTGGGCTAAACATCTTGGCATTAAAATTGAACTATGATGACCCATTAGAGGCAGCCCAATTGCATGGTGGGTGTGGGCTTTGGGGCTTGTTGTTTACAGGGTTGTTTGCCAAAGAAGGATTTGTAATTCAAACCTACAATAAAGGTGAGATAGGAGTTGTAAGGCCTTATGGTCTAATACTTGGAGGTGGATTTGGATTAATTGGAGCCCAAATTGTTTAG 1101 0.4505 MEASWEQSVTNSINTIYLLFSAYHVFVMQIGFAMISAGSVRAKNAMNIMLINVVDAVVGSISFYLFGFAFAYGDSNPFIGTNLFALANIPNRTYDYSFFLYQWAFAIAVAGITIVVHWVWSSSGWLSASSSEPFLGSGAIDFAGSGVVHLVGAIAGHWGSIIEGPRVGQFDAFGKPIPLRGHNATLVVLGTFLLWFGWFEFNPGSFDKIVVAYSSSSDQGNWTSVGRIAVVTTLAGSTASIVTLFGQRLLIGHWDTMDVCNGLLGGFVAITSGCSVVEPWAAIICGFVSAWILIGLNILALKLNYDDPLEAAQLHGGCGLWGLLFTGLFAKEGFVIQTYNKGEIGVVRPYGLILGGGFGLIGAQIV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211958g00001 366 SUPERFAMILY Ammonium transporter 10 365 - -
Stsc211958g00001 366 Gene3D Ammonium transporter AmtB like domains 2 114 IPR029020 -
Stsc211958g00001 366 Gene3D Ammonium transporter AmtB like domains 115 366 IPR029020 -
Stsc211958g00001 366 PANTHER AMMONIUM TRANSPORTER 10 113 - -
Stsc211958g00001 366 Pfam Ammonium Transporter Family 113 365 IPR024041 GO:0008519|GO:0016020|GO:0072488
Stsc211958g00001 366 Pfam Ammonium Transporter Family 18 113 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211958g00001 Stsc-Chr211958 9819 10996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211958g00001 7 366 Inorganic Solute Cotransporters AT1G64780 60.560 2.16e-158 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211958g00001 K03320 - qsa:O6P43_014033 590.112