Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211956g00004 ATGGCGAATGAAGGAGGAGGAACCATAATCTCAGATGAAAATGGTATTACAACAATTTGTGTGCCAAGAAGGGATAGTTATTTGCGTTCTTTAGGGATTTGGGTTGGGGATAATCCATTTGATTTTGTTATTCCTGTCACCTTGTTCCAAATCAGTATCTTCATTATAGTTTCTCGAGTTTTGTACATTCTTCTCAGGCCTCTTAGCACACCCAAATTCGTCTGCTATGTCTTGGGTGGTATTCTTGTAGGGCCATCAATTATGGGTGACCGAATATTTGAAGTTGTATATCCACCAATACAATCTCCGATCTTGTTCTTATTGGGAAGGATAGGTGCTGCATATAGTGTGTTCTTCATTGTCCTCAAAATGGACATAGTCCCAACCATTAAAGCAGCTAAAAAATATTGGAAATTAGGTTCCATACCATTCTTCTGTTCTTTAATCGTTATGTACACCATAACACACCATACAAGCTTGGATTACAGAGGCAGATTAAAGCAACCAAACATCCATTGTTGGACTAGCTTCTCCGTCGTCTCCGATTTCTTAATGGAACTCAACCTTATAACAACAGAGCTAGGCCAGATTGCTCTGTCCACGGCCGTCGTCACCGAGATCTCGCAGTGGATCATGTTGTTATTCTATTTGATGAAAACAAACACACTGAGATTCTCATTTTCGCACCTGGGTTTGATTGCGGCGTTCTTGATGTTCTTGTGCTTTGTTGTTAGGCCAATAATGAAGGTGATAATTAAGCGAACGCCCAAGGGGGAGCCTGTCAAACAGGGCTACGTTATTATGGTCCTCTTAGGTGTTATTGCCATGGCAACAATTAGTGACATAATAGGAATAACCTTCATAATGGGACCTACTCTTTATGGTTTGTTTATCCCTAATGGTCCTCCATTGGCAACTACAATAGTGGAGAGGACTGAGGTTGTTATATCAGAAATTATGATGCCTTTTTTCTATCTGACTTTGGGCACCACCACAAGAATAAGTAGAATTACTGATAAATATTGGTTCCAGAATTTGATAATTGAGGCTGTGGTGTTGGCTGGGGTTGCAACAAGAGTGGTTTTAACTATGGTGATTGGAATGACACATAATATAAGGTGCAAACATGGGTTTATTCTTGGCCTTATGATGAGCATTGAAGGCATACTTGACCTAATCTTGTTTCATGGAATGATGAGATTCCGGTTATTTGAAGATTACATATACGTGATACTTGAACTCCATGCATTGTTGATAACGGCCATTTCGGCACCATTGATAAAAGTCTTGTACAAGCACCATCACCGTATATCAAAAGAACCAAGCGCACACGAAGGAAGAGTGAGAACAATCCAAAGCACTTCTCTCACCTCAAAAGTCACCATCATTTCTTGCATTCACCAAGAAGCAAACGTTCACAGCATGATCGGCCTTCTAGAAGCCTTGAACACAAGCCAAGAGAGCCCTCTCTTTGTCCACGTCATACACCTCGTTGAGCTCTTCGGGAAAAGCGCCCCAATTCTTCTCCCTCTCAAGAAGCAAAACCACAAGAAGAAGGCGGCGGGGGCGTCGTCTTCTTCTATCAATTATCATGAAACCAATCACATCATGCGGGCGTTTGAGAATTACTCGCGAAATTCGACTGCTGGGAATGTGAACGTGCTTTCCTACGTGAATGTTGCGCCTTATAAGATCATGCATGCTTCTGTTTGCAACCTGGCAGATCAAAAGAGTGTGCCATTGATTCTTGTTCCGTTCTATGAACACCATCAAATCATTAATAGCCATGACGCAACCTTCATTCGTGACCTTAACATTTCCTTTCAACAGAACGCAAGATGTACAGTAGGCATCCTAGTTGACAGGTACTCAACATTGTTTTTGAACGCGTCCTCATCATGTTTTCATGTGGCTATCTTCTTCATTGGTGGGCAAGACGATAGAGAAGCACTAGCATTAGGTCTTAGGATGTTAGACCGTACAAGCATCAAGGTCACACTCTTGCAATTCATTCTACAACATCATAACGACAACAACAACCTCTCATCATCCCCGGGGTTAAATTCAAATAATAATAGACAAGAAGCGGAAGAAGAAGAAGAAGCGCAGAGAATATTAGACGAATGCTTGGTAGACGAGTTCAAGGGGAAGATGATCGTCCAAAACAATGCCGATTTTTGCGAGATTGTGGTAGAAGACTCCATAGGTGTTCTAGAAGCGATTCGAGGCATGGAGATGGAGGTGTATGACCTTGTCGTTGTGGGAAAGAGGCATCAATTTATGAGCATCACCGATGAAGAGATGATGGATTTCATGGAAAATGCGGATCAGTTAGGAGTTATTGGGGACATGTTAGCTTCCACAGAATTCTATGCTGGAAAAATTTCACTCTTGGTCATGCAATGTGGAGGCAAGAAGGCTTTGGATAAGAAAACATCTACCAATCGCGGTTTAAAATTTTAA 2463 0.4162 MANEGGGTIISDENGITTICVPRRDSYLRSLGIWVGDNPFDFVIPVTLFQISIFIIVSRVLYILLRPLSTPKFVCYVLGGILVGPSIMGDRIFEVVYPPIQSPILFLLGRIGAAYSVFFIVLKMDIVPTIKAAKKYWKLGSIPFFCSLIVMYTITHHTSLDYRGRLKQPNIHCWTSFSVVSDFLMELNLITTELGQIALSTAVVTEISQWIMLLFYLMKTNTLRFSFSHLGLIAAFLMFLCFVVRPIMKVIIKRTPKGEPVKQGYVIMVLLGVIAMATISDIIGITFIMGPTLYGLFIPNGPPLATTIVERTEVVISEIMMPFFYLTLGTTTRISRITDKYWFQNLIIEAVVLAGVATRVVLTMVIGMTHNIRCKHGFILGLMMSIEGILDLILFHGMMRFRLFEDYIYVILELHALLITAISAPLIKVLYKHHHRISKEPSAHEGRVRTIQSTSLTSKVTIISCIHQEANVHSMIGLLEALNTSQESPLFVHVIHLVELFGKSAPILLPLKKQNHKKKAAGASSSSINYHETNHIMRAFENYSRNSTAGNVNVLSYVNVAPYKIMHASVCNLADQKSVPLILVPFYEHHQIINSHDATFIRDLNISFQQNARCTVGILVDRYSTLFLNASSSCFHVAIFFIGGQDDREALALGLRMLDRTSIKVTLLQFILQHHNDNNNLSSSPGLNSNNNRQEAEEEEEAQRILDECLVDEFKGKMIVQNNADFCEIVVEDSIGVLEAIRGMEMEVYDLVVVGKRHQFMSITDEEMMDFMENADQLGVIGDMLASTEFYAGKISLLVMQCGGKKALDKKTSTNRGLKF 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211956g00004 820 Gene3D - 46 440 IPR038770 -
Stsc211956g00004 820 PANTHER CATION/H + ANTIPORTER 28 801 - -
Stsc211956g00004 820 Pfam Sodium/hydrogen exchanger family 54 421 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211956g00004 Stsc-Chr211956 22418 26950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211956g00004 26 801 Antiporter Super Family AT2G13620 30.517 3.02e-118 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211956g00004 - - aip:110268392 1251.88