Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211946g00003 ATGGGGGCAATAGGGTGTGGGATTCCATTCTTGGCCATGGCAATTGTGCAATCAAGCTATGCTGGGATGACAATTACTTCAAAGCTTGCTATACAATCTGGCATGAGCCCTCTTGTGCTCGTTGCTTATCGCCAAATCTTTGCCACTCTCTCCCTTGCTCCCTTTGCTTATTGGTTTGAACGGAATACGGTTCCCCGTATGACAAAACGCACCGCATTACAGATACTGGTGTCCTCTTTCACAGGAGTTACCGGAAATCAAATACTGTATTTTGTTGGGTTAAAATATTCAACCGCTACAATTGCATGTGCACTCACCAATTTGCTCCCAGCTTTTACTTTCATCCTTGCAGTCCTCTGCAGACAAGAGTTCTTGAGAATCAAAACAAGGGCAGGGCAAGCAAAGGTGGTAGGTACAGTTCTAAGTGTTGGTGGAGCTCTTCTTTTATCATTTTACCATGGAAAGCCCCTTGGTCTTGGGGAATCAGGTATTCACTGGAAATTTGTTGAAGAAATGGAAGGAACAAGCTCCTCTGCTGCCCCAACGAACTTGCTTCTTGGCCCTTTTGCATTGATTGCCAGTTCTCTTGTTTGGTCTGTCTGGTTCATAGTTCAAGCAGAGATGAGCAAGAATTACGCAGCTCCATATACGAGCAGCCTGTACATGTGTATGATGGCAAGCATTCAGTGTGTGGCCATCGCATTGTGTTCTAACCACACCCTCTCAGCTTGGTCACTGCACAATCCTATCAGACTCTCCTCTGCACTTTACGCCGGAATAGTGTGCACTGGGCTAGCATATGGGGTGATGGCATGGACAATTGAAAGAAAGGGGCCTCTGTATGTCTCTGTATTCACCCCCTTGATGCTTGTTATCACAGCTCTTGTCACCTGGGCTCTGCTTCATGATCAACTCTACGTTGGAACTGCCATTGGATCTGTGATTATAGTTTTGGGGCTCTATGCTGTTCTGTGGGGAAAGAGCAAAGAGATGAACACGAAAAAAGGTGTTCAAGTGACATTAACAGATTCAGATTCAATAACCAAGGATAAAGAAGAAGAAGATGACGGTGATGATATGAGTGAAATGGAAAAGCAGTGCAGTGACCATTCCAATTGTAACCATAATAACAAATAA 1137 0.4468 MGAIGCGIPFLAMAIVQSSYAGMTITSKLAIQSGMSPLVLVAYRQIFATLSLAPFAYWFERNTVPRMTKRTALQILVSSFTGVTGNQILYFVGLKYSTATIACALTNLLPAFTFILAVLCRQEFLRIKTRAGQAKVVGTVLSVGGALLLSFYHGKPLGLGESGIHWKFVEEMEGTSSSAAPTNLLLGPFALIASSLVWSVWFIVQAEMSKNYAAPYTSSLYMCMMASIQCVAIALCSNHTLSAWSLHNPIRLSSALYAGIVCTGLAYGVMAWTIERKGPLYVSVFTPLMLVITALVTWALLHDQLYVGTAIGSVIIVLGLYAVLWGKSKEMNTKKGVQVTLTDSDSITKDKEEEDDGDDMSEMEKQCSDHSNCNHNNK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211946g00003 378 PANTHER WAT1-RELATED PROTEIN 9 340 IPR030184 GO:0016020|GO:0022857
Stsc211946g00003 378 MobiDBLite consensus disorder prediction 342 378 - -
Stsc211946g00003 378 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Stsc211946g00003 378 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Stsc211946g00003 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Stsc211946g00003 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211946g00003 Stsc-Chr211946 15320 18343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211946g00003 8 355 Nodulin-like Gene Family AT1G09380 54.598 1.44e-141 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211946g00003 - - ahf:112709006 539.65