Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211946g00002 ATGGGCGTTGTTTCAGAACCAACGATTCAGATTAAAGATCTCAAATTCACGTACCCTGGAATCGACGGTCACCCTCCTCCGGGCTCCACTCCTCTCATTCAGGACTTCTCTCTGTCGCTCTCCTCCGGCGACCGATGCCTCCTTGTTGGATCCAATGGCGCTGGCAAGACCACCATTCTCAAGATATTGGGAGGCAAGCACATGGTCGAACCGGACATGGTCCGTGTTCTTGGAAGATCGGCTTTTCATGACACCAATTTGACATCTTCTGGTGATCTCTGTTATCTTGGTGGTGAGTGGAGGCGAGATGTTGCTTTTGCAGGCTATGAGGTTGCAATACAAATGGATGTTTCAGCTGAAAAGATGATATTTGGTGTGGCTGGGACTGATCCCGAAAGAAGAGCAGAGCTAATCAAGGTATTGGATATAGATCTCTCCTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTACTCGATGAGATAACAGTCGACCTTGATGTTCTAGCTCGAGCTGACCTTTTGAAGTTCCTAAGAAAGGAATGTGATGAGAGGGGTGCCACTATTATATATGCAACACATATATTTGACGGTCTTGAGGATTGGCCAACTAATATAGTTTATGTAGCGCATGGAAAGCTGCAATTAGCCATGCCTATTAATAAAGTCAAGGAAACTAGCAAACTGTCATTAATGAGAACAGTTGAATCTTGGCTAAGGAAAGAACGCAATGAAGATAGAAGGAAAAGAAAAGAGAGGAAGGCAGCTGGTCTTCCTGAATTTGATAGGCAACTTGATGGAAGCCGCGTAGCAGGGGACCCAGCTCGTGCTGCTGTTCGAGTAATCAACAATGGCTGGGCAGCAGGGCGATTGACGTCCACGGTTGCTGGTGAGGAGAACTTTATCCTCAGCTCAAACAGAGTATTAAGGCAGTAG 984 0.4583 MGVVSEPTIQIKDLKFTYPGIDGHPPPGSTPLIQDFSLSLSSGDRCLLVGSNGAGKTTILKILGGKHMVEPDMVRVLGRSAFHDTNLTSSGDLCYLGGEWRRDVAFAGYEVAIQMDVSAEKMIFGVAGTDPERRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECDERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPINKVKETSKLSLMRTVESWLRKERNEDRRKRKERKAAGLPEFDRQLDGSRVAGDPARAAVRVINNGWAAGRLTSTVAGEENFILSSNRVLRQ 327
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc211946g00002 327 Gene3D - 6 273 IPR027417 -
Stsc211946g00002 327 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 9 252 IPR003439 GO:0005524
Stsc211946g00002 327 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 8 256 - -
Stsc211946g00002 327 Pfam ABC transporter 34 179 IPR003439 GO:0005524
Stsc211946g00002 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 246 IPR027417 -
Stsc211946g00002 327 SMART AAA_5 42 229 IPR003593 GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc211946g00002 Stsc-Chr211946 10952 14952 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211946g00002 9 206 Calmodulin-binding Proteins AT2G36910 23.721 3.33e-09 56.2