Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211945g00004 ATGGCTCTGGAGGTTGCTGTCAAAGCCGCTGTCGGTGCTCCCACCATTCTCGGAGACTGTCCACTTTCGCAAAGGGTGCTTCTAACTTTGGAGGAGAAGAATATCCCTTACTCCACCCACCTCATCAATCTCACCGACAAACCCCAATGGTTTTTGGAAGTGAATCCTAAAGGGACGGTTCCAGTGGTTAAGTTTGATGGCAAATGGGTTTCTAGTTCCGATTATATTGTTGACCGCCTTGAGGAAAAGTACCCTCAACCTTCTCTCCTCACTACTCCCCCTGAATCTGCCTCCGTGGGATCAAAGATATTTGAGGCTTTCGGGAAGTTTCTCAAGAGCAAAGATCCAAATGATGGATCAGAGCAAGCATTGCTTGCTGAGTTGAAAGCTTTGGATGAACACCTTAAGAACCATGGTCCATTTGTTGCTGGGGAGAAGGTTACTGCTGTTGATCTGAGTTTGGCACCAAAACTCTACCATCTAGTCATAGCACTTGACCACTTCAAGAACTGGACTATTCCTCAGGATTTGGCACATCTCCACAACTATATCAAGCGTGGTTTTCTTCCCAGCGATGAAGCAGGAGCTGGCGATCTCTCCTCAAATGCATTTCGCAGGCAACAATTTCGGACGCCCCTTTTCTGGTCGCGGTGCGGTGCGGTGGATCCGTTGCGGCAGTCGGTGCCGCTTGGAGTCCGTCTCTATGGTGCGATTGTGCTTCTGAAGAGTGCTATAAATTGGGGGTGTGATTTTGTTCTGCGTATCGTGTGCTTCGCAAACACAATGGCTCCGGGAAGAGTTATGGTTCCGAGATCGGCGGCAGCAAACGAACGCAGAACTTTCACACTCAACCTGCCACGGAATGCGGCAGTTGCCGTGGTGCCTCATATATTTTACAGGCGCTATCGGCCACGTCTTGGTGCAAGTGTTGTGCATGGATTCTTTGCATCTGCTTGTAGTTTGCCATTTGACTACGCCAAGACCCAGATTCAAAAGATGCAACCTGATGCTAAAGGAAAATATACATACAATGACTCTGTTGATTGTACTCTCAAAACCTTGAAAGCTGGAGGACCTTTCAGTTCTACACCGGATTCCCTGTCTACTGTGTTAGAATCGCTCTTCATGTCATGCATCTGCAGCAGTGTACCATTGCCTACTTCTTTGTTTGACAAGAACATTGATATTGTTCTTAAGTGA 1200 0.4767 MALEVAVKAAVGAPTILGDCPLSQRVLLTLEEKNIPYSTHLINLTDKPQWFLEVNPKGTVPVVKFDGKWVSSSDYIVDRLEEKYPQPSLLTTPPESASVGSKIFEAFGKFLKSKDPNDGSEQALLAELKALDEHLKNHGPFVAGEKVTAVDLSLAPKLYHLVIALDHFKNWTIPQDLAHLHNYIKRGFLPSDEAGAGDLSSNAFRRQQFRTPLFWSRCGAVDPLRQSVPLGVRLYGAIVLLKSAINWGCDFVLRIVCFANTMAPGRVMVPRSAAANERRTFTLNLPRNAAVAVVPHIFYRRYRPRLGASVVHGFFASACSLPFDYAKTQIQKMQPDAKGKYTYNDSVDCTLKTLKAGGPFSSTPDSLSTVLESLFMSCICSSVPLPTSLFDKNIDIVLK 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211945g00004 399 Pfam Glutathione S-transferase, C-terminal domain 119 186 - -
Stsc211945g00004 399 Gene3D Glutaredoxin 1 89 - -
Stsc211945g00004 399 Gene3D Mitochondrial carrier domain 272 383 IPR023395 -
Stsc211945g00004 399 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Stsc211945g00004 399 Gene3D - 91 191 - -
Stsc211945g00004 399 SFLD Main (cytGST) 19 186 - -
Stsc211945g00004 399 SUPERFAMILY Thioredoxin-like 18 87 IPR036249 -
Stsc211945g00004 399 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 188 IPR044627 GO:0033355|GO:0045174|GO:0098869
Stsc211945g00004 399 SFLD Glutathione Transferase (cytosolic) 19 186 IPR040079 -
Stsc211945g00004 399 FunFam Glutathione S-transferase DHAR3, chloroplastic 91 192 - -
Stsc211945g00004 399 SUPERFAMILY GST C-terminal domain-like 83 187 IPR036282 -
Stsc211945g00004 399 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Stsc211945g00004 399 SUPERFAMILY Mitochondrial carrier 305 360 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211945g00004 Stsc-Chr211945 27280 31675 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211945g00004 1 188 Glutathione S-transferase Gene Family AT1G75270 70.899 5.38e-93 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211945g00004 K21888 - jre:109022303 299.671