Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211940g00001 ATGAACTTCAGAGGCTATGGTGATAACCCCACCAATAATGGTGATGGAATGGGTGGGAAGCCACCACCGGCAAATGTCACTCTGGTGAGGCAGCCTTCGGTTTATTCGCTTACTTTCGACGAGTTCCAGAACACATTGGGTGGGATTGGGAAGGATTTTGGATCCATGAACATGGATGAGCTCTTGAAGAATATATGGACTGCTGAGGAGTCTCAGGCAATGGCGTTTTCTTCGGCCGGGGTAGCTGCCGGCATCAATGGTGGTGATCACAACAACCCAACTGGGAACTTGCAAAGACAAGGCTCTTTGACGCTTCCAAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAGGGATTTGATGAAAGAAAGTGGCGGTGGCAGCAGTGCTGGAGCTGGAGCCAAAGATGGAAGTAGCAATGGGGTTTCATCTGTGCCTCAAAATCAAGGGCAACAAGCATTAGGAGAAATGACATTGGAGGAGTTCTTGGTGAGAGCTGGTGTTGTGAGAGAAGATGCTCCTCAACAAGCTCAACAAATGGCAAGGTCTAATGCTAACAACAATGGTTGGTATGGTGGTGGTGGTGGTGACTTTGCTAGATCAAACAACGGCAATGGCTTACTTCTTGGTTTTCAACAACCAAATAGAAGTAATGGGAACAATCTTGCTAATAACTTGGTTCCCAAGCCTCCTCCTCCTCCTCCTCAGCAACAAGCACAGCAGCAGCACCAACACCAGCAGCCACCGCCCCTTTTCCCGAAGCCTGCAAATGTGGCTTTTGCTTCTCCTATGCATATGTTGAACAATGCTCAGCTTGCTAGCCCTGGCACAAGGGGAGGGATGATTGGAATGCCAGAGCGTTCGATGAATGGCTCGGTAGTTCAAAACAATGGGCTGCCTAGTGTTGGAATCGTTGGTTTAGCCCCGGCCAATGTCACGGCCTCGGGTGCTTCTCCTGCGAATAAAATGTCGCCAGATATGATTGCCAAGAGCGGTGTGGATACTTCTTCAATGTCGTTGTCACCGGCTCCTTATGTAATCAACAGGGGAAGGAAGTGCAGTGCTATAGAGAAAGTTGTTGAGAGGAGACAGAGGAGAATGATAAAAAATAGAGAATCAGCTGCAAGATCAAGGGCTCGCAAGCAGGCCTATACTTTTGAACTAGAAGCTGAAGTTCAGAAGCTTAAGGAAATAAACAAAGAATTACAAAAAAAGCAGGAAGAAATTATGGAAATGCAGAAAAATCAGAATATGGACTCTTCATTCAGGCCATTGGCAAATAAAAGACAGTGCTTGAGAAGGACACTTACAGGTCCATGGTAG 1326 0.4698 MNFRGYGDNPTNNGDGMGGKPPPANVTLVRQPSVYSLTFDEFQNTLGGIGKDFGSMNMDELLKNIWTAEESQAMAFSSAGVAAGINGGDHNNPTGNLQRQGSLTLPRTLSQKTVDEVWRDLMKESGGGSSAGAGAKDGSSNGVSSVPQNQGQQALGEMTLEEFLVRAGVVREDAPQQAQQMARSNANNNGWYGGGGGDFARSNNGNGLLLGFQQPNRSNGNNLANNLVPKPPPPPPQQQAQQQHQHQQPPPLFPKPANVAFASPMHMLNNAQLASPGTRGGMIGMPERSMNGSVVQNNGLPSVGIVGLAPANVTASGASPANKMSPDMIAKSGVDTSSMSLSPAPYVINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVQKLKEINKELQKKQEEIMEMQKNQNMDSSFRPLANKRQCLRRTLTGPW 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211940g00001 441 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 441 IPR043452 GO:0003700|GO:0045893
Stsc211940g00001 441 Pfam bZIP transcription factor 363 416 IPR004827 GO:0003700|GO:0006355
Stsc211940g00001 441 MobiDBLite consensus disorder prediction 123 152 - -
Stsc211940g00001 441 Coils Coil 386 416 - -
Stsc211940g00001 441 MobiDBLite consensus disorder prediction 177 191 - -
Stsc211940g00001 441 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 361 418 - -
Stsc211940g00001 441 CDD bZIP_plant_BZIP46 363 417 - -
Stsc211940g00001 441 SMART brlzneu 359 420 IPR004827 GO:0003700|GO:0006355
Stsc211940g00001 441 MobiDBLite consensus disorder prediction 1 26 - -
Stsc211940g00001 441 MobiDBLite consensus disorder prediction 174 258 - -
Stsc211940g00001 441 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 361 412 IPR004827 GO:0003700|GO:0006355
Stsc211940g00001 441 MobiDBLite consensus disorder prediction 206 226 - -
Stsc211940g00001 441 Gene3D - 361 418 - -
Stsc211940g00001 441 SUPERFAMILY Leucine zipper domain 363 412 IPR046347 GO:0003700|GO:0006355
Stsc211940g00001 441 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 366 381 IPR004827 GO:0003700|GO:0006355
Stsc211940g00001 441 MobiDBLite consensus disorder prediction 134 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211940g00001 Stsc-Chr211940 12731 16356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211940g00001 1 441 bZIP Transcription Factor Family AT4G34000 46.074 6.91e-106 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc211940g00001 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211940g00001 K14432 - gmx:100776600 483.796