Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211924g00003 ATGGCGAAGGATCAACTTCAAGTGTTGAATGCGCTTGATGTGGCGAAAACACAATGGTACCATTTCACAGCAATCATTGTTGCAGGAATGGGATTCTTCACTGATGCCTACGATTTGTTTTGCATCTCCCTCGTAACCAAGCTACTCGGCCGGATATACTACCATGTCGACGGTGCAGAAAAGCCCGGAACCTTGCCGCCCAATGTCTCCGCCGCAGTTAACGGCGTAGCCTTCATCGGAACACTCTCCGGCCAACTCTTCTTTGGCTGGCTAGGTGACAAGCTCGGGAGGAAGAAAGTCTACGGCATGACTCTATTGCTTATGGTGATTTGCTCCGTCGCCTCCGGCCTCTCGTTCGGTCGGGAACCGAAGTCGGTTATGGTGACCCTCTGCTTCTTCCGGTTCTGGTTAGGATTCGGTATTGGCGGAGACTACCCGCTTTCTGCCACAATAATGTCAGAGTATGCAAATAAGAAAACTCGCGGCGCTTTTATTGCGGCGGTTTTCGCTATGCAAGGGTTTGGGATTTTGGCGGGAGGCCTATTTGCAATTGTTATTGCATCCATTTTTAGGGTGAAATTCAACGCTCCGCCGTATGAAATTGATCCGATAGCTTCAACAGTTCCGCAAGCCGATTTCGCCTGGAGAATAATTCTTATGGTTGGTGCGCTTCCGGCGGCTCTGACTTACTATTGGAGGATGAAGATGCCGGAAACCGCACGATACACGGCGCTGGTTGCGAAGAACATGGAGCAAGCAGCAAAGGATATGTCTAAAGTTATGCAGATGGAGATCCAAGCAGAACAAGTAAAGAAAGATGAGACTAAAGACTATGGCTTGTTCTCCAAGCAATTCGCCGCGCGCCACGGCTTGCATTTGCTTGGAACAGCTAGCACTTGGTTCTTACTTGATATTGCATTCTATAGTCAGAATCTCTTCCAAAAAGATATCTTCAGCGCAATCGGTTGGATTCCTCCGGCAAAAACCATGAACGCTTTGGATGAAGTTTTCAAGATTGCAAGAGCTCAAACACTCATTGCTCTTTGCAGTACAGTTCCTGGATACTGGTTTACAGTGGCTCTAATTGATAAGATTGGAAGATTCACAATTCAATTGATTGGGTTCTTCTTTATGACTGTGTTCATGTTCGCCCTAGCCATTCCTTATGAGCATTGGACTCTTAAGGAGAATCGCATCGGATTCGTGGTGTTGTATTCCTTAACATTCTTCTTCGCAAATTTTGGACCAAATTCAACCACTTTTGTTGTCCCAGCGGAGATCTTCCCTGCAAGATTCCGTTCTACATGCCATGGGATTTCATCAGCTTCGGGAAAGCTTGGTGCTATGATTGGTGCTTTTGGATTCTTGTATTTGGCGCAGAGTCCGGACAAGACCAAGACGGATGCCGGTTACCCTCCGGGCATTGGCGTCAAGAATTCATTGCTTGTCTTGGGAGTGGTTAATATTTTAGGGTTCATATTTACATTCTTAGTGCCTGAGCCAAAGGGAAAATCTTTGGAGGAGATATCGGGTGAGAATGAGCAAGAAGATGAGCTTGAAAACAAGGTATAG 1572 0.4669 MAKDQLQVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVSAAVNGVAFIGTLSGQLFFGWLGDKLGRKKVYGMTLLLMVICSVASGLSFGREPKSVMVTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGLFAIVIASIFRVKFNAPPYEIDPIASTVPQADFAWRIILMVGALPAALTYYWRMKMPETARYTALVAKNMEQAAKDMSKVMQMEIQAEQVKKDETKDYGLFSKQFAARHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALDEVFKIARAQTLIALCSTVPGYWFTVALIDKIGRFTIQLIGFFFMTVFMFALAIPYEHWTLKENRIGFVVLYSLTFFFANFGPNSTTFVVPAEIFPARFRSTCHGISSASGKLGAMIGAFGFLYLAQSPDKTKTDAGYPPGIGVKNSLLVLGVVNILGFIFTFLVPEPKGKSLEEISGENEQEDELENKV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211924g00003 523 FunFam Inorganic phosphate transporter 1-6 20 523 - -
Stsc211924g00003 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 503 IPR020846 GO:0022857
Stsc211924g00003 523 SUPERFAMILY MFS general substrate transporter 11 510 IPR036259 -
Stsc211924g00003 523 CDD MFS_PhT 25 502 - -
Stsc211924g00003 523 NCBIfam phosphate:H+ symporter 11 512 IPR004738 GO:0005315|GO:0006817|GO:0016020
Stsc211924g00003 523 Gene3D MFS general substrate transporter like domains 20 523 IPR036259 -
Stsc211924g00003 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 501 - -
Stsc211924g00003 523 Pfam Sugar (and other) transporter 26 510 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211924g00003 Stsc-Chr211924 27436 29109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211924g00003 1 518 Inorganic Solute Cotransporters AT3G54700 84.586 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211924g00003 K08176 - twl:120011406 927.161