Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211918g00007 ATGATCACCCCTTATGTTGGAATGGTGTTTAAGAGTGATGATGAAGCTTTTGAGTATTATGGCAATTTTGCTAGGAAGAATGGGTTCTCTGTTAGGAAGGAAAGGTCTAGGGTTAGTCCCCAGTTAGGAATTTACAAGCGTGACTTTGTTTGTTACCGTTCGGGATTCGCCCCGGTGAAGAGGAAGCCTAATGGAGAGCACCATAGAGATAGGAAATCGGTTAGGTGCGGATGCGATGCGAAAATGTATCTGTCTAAGGAGGTTGTTGATGGGGTTTCCCAATGGTTTGTTGTGCAATTCAGTAACATCCATAATCATGAGCTTCTAGAAGATGACCAGGTTCGGCTTCTTCCGGCATATCGCAAGATTCACGAGGCTGATCAAGAGCGCATACTCTTGCTTTCTAAAGCAGGGTTTCCGATACACCGGATAGTGAAGATGCTGGAGCTGGAAAAGGGGATTCAAGGTGGGCAATTGCCTTTCTTGGAGAGGGATGTGAGGAACTTTGTTCAAAACCGCAAGAAGGTTGTTCAAGAGAACGAGGCATTGCTCAGTGAGAAGAGGGAAAATGATATATCAGAACTTCTTGAGGCCTGCAAAGCCATGAAAGAAGTTGATGGTGACTTTGTTTATGATTTCACAGTTGATGAGAATGATAAAGTTGAAAATGTAGCTTGGTCATATGGTGATTCTGTTAATGCAAATGCTATGTTTGGCGATGTAGTTTATTTCGACACGACATATCGATCCATCACTTATGGATTGCTTTTTGGAGTGTGGTTTGGTATTGATAGCTGTGGCAGAACCATGTTTTTCGGTTCTGTTTTGTTGCAGGATGAAACTCCTCAATCCTTCTCATGGGCATTGCAGACTTTTCTCCGATTCATGAACGGAAGATGTCCACAAACAATTCTAACTGATCTTGATCCTGGGCTTAAAGATGCCATTAGAAGCGAATATCCAGGGACTAAACATGTCATTCCACCATGGAATATTCTATACAAGATAACCACATGGATTTACTGTATTCTGTTCGAGCATCCTGGGCACAATCCTATGTGA 1062 0.4266 MITPYVGMVFKSDDEAFEYYGNFARKNGFSVRKERSRVSPQLGIYKRDFVCYRSGFAPVKRKPNGEHHRDRKSVRCGCDAKMYLSKEVVDGVSQWFVVQFSNIHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENEALLSEKRENDISELLEACKAMKEVDGDFVYDFTVDENDKVENVAWSYGDSVNANAMFGDVVYFDTTYRSITYGLLFGVWFGIDSCGRTMFFGSVLLQDETPQSFSWALQTFLRFMNGRCPQTILTDLDPGLKDAIRSEYPGTKHVIPPWNILYKITTWIYCILFEHPGHNPM 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211918g00007 353 Pfam MULE transposase domain 241 332 IPR018289 -
Stsc211918g00007 353 Pfam FAR1 DNA-binding domain 18 109 IPR004330 -
Stsc211918g00007 353 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 337 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211918g00007 Stsc-Chr211918 25181 27633 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc211918g00007 MULE 2.3e-15 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211918g00007 - - aprc:113874854 660.218