Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211910g00008 ATGGCAAGGGACGGGAGCGTGGTCCCGGCGGACCCGCAGGCGATGGCGGTGGTGAAGAAGAAGACACAGTCATCGCGAAGCTGGATTCTGTTCGATGCATCTGGGAAAGGGTCTCTGCTGGATGTGGACAAGTATGCCATCATGCACAGGGTTCAGATTCACGCTCGTGATCTCAGGATCCTTGATCCCTTGCTCTCTTACCCTTCCACCATCCTCGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAGGCGATTATCACAGCTGAAGAGGTATTGCTGCGTGATCCAACGGATGATAACGTGGTCCCTGTTGTTGAGGAACTGCAAAGACGACTCCCTCAAGTAGGTTCCGGTCATCAACAAGAAGGGGATGGCAAAGAGTTCAATGTTGGTCAACATGATCTGGAAGGAAATGAGGAAGATGAGTCACCCTTTGAGTTCCGAGCTTTGGAGGTAGCTTTAGAAGCCATTTGTAGCTTCCTTGCTGCGCGCACAACAGAATTGGAGATGGCTGCTTATCCTGCATTGGATGAACTTACCTCTAAGATTAGCAGCCGTAATTTGGACAGAGTTCGAAAATTGAAGAGTGCAATGACTAGGCTGACTGCTAGGGTGCAAAAGGTGAGAGATGAACTTGAACAACTACTAGATGATGATGATGATATGGCTGACCTCTACTTATCAAGAAAGGTGGCAAGCGCATCACCAGTTAGTGGATCACGTGGTGGCGGTGGTGCTTGGTTTGCTGCTTCCCCCACCATTGGATCAAAGATATCCAGAGCAAGTAGAGCAAGTTTAGTCACAGTTCATGATGAAAATGATGTGGAAGATCTTGAAATGTTACTCGAGGCTTATTTCATGCAAATCGATGGCACATTGAACAAATTAACCACGCTTCGAGAGTATATTGATGATACCGAAGATTATATCAATATTCAACTTGACAATCATCGAAATCAGCTTATTCAGTTAGAACTCTTCCTTAGCTCTGGAACTGTGTGCCTATCTTTCTTTTCGTTGGTGACTGCAATATTTGGCATGAACATTCCATATACCTGGAATGACAACCATGGTTACATGTTCAAATGGGTAAGCTCAGACATTAGTATGCGACAAAACCTTTTAACTTGTGCTTTTGTGAATACAAAAATGTAA 1164 0.4519 MARDGSVVPADPQAMAVVKKKTQSSRSWILFDASGKGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDDNVVPVVEELQRRLPQVGSGHQQEGDGKEFNVGQHDLEGNEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKVASASPVSGSRGGGGAWFAASPTIGSKISRASRASLVTVHDENDVEDLEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFFSLVTAIFGMNIPYTWNDNHGYMFKWVSSDISMRQNLLTCAFVNTKM 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211910g00008 387 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 368 IPR039204 -
Stsc211910g00008 387 CDD Mrs2_Mfm1p-like 28 373 IPR039204 -
Stsc211910g00008 387 MobiDBLite consensus disorder prediction 115 144 - -
Stsc211910g00008 387 Gene3D - 13 99 - -
Stsc211910g00008 387 Coils Coil 194 221 - -
Stsc211910g00008 387 Gene3D Magnesium transport protein CorA, transmembrane region 109 324 - -
Stsc211910g00008 387 MobiDBLite consensus disorder prediction 129 144 - -
Stsc211910g00008 387 FunFam Magnesium transporter MRS2-1 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211910g00008 Stsc-Chr211910 36663 41071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211910g00008 1 377 MRS2 Gene Family AT5G64560 78.364 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211910g00008 K16075 - gmx:100810239 613.224