Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211910g00007 ATGGCAAGGGACGGGAGCGTGGTCCCGGCGGACCCGCAGGCGATGGCGGTGGTGAAGAAGAAGACACAGTCATCGCGAAGCTGGATTCTGTTCGATGCATCTGGGAAAGGGTCTCTGCTGGATGTGGACAAGTATGCCATCATGCACAGGGTTCAGATTCACGCTCGTGATCTCAGGATCCTTGATCCCTTGCTCTCTTACCCTTCCACCATCCTCGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAGGCGATTATCACAGCTGAAGAGGTATTGCTGCGTGATCCAACGGATGATAACGTGGTCCCTGTTGTTGAGGAACTGCAAAGACGACTCCCTCAAGTAGGTTCCGGTCATCAACAAGAAGGGGATGGCAAAGAGTTCAATGTTGGTCAACATGATCTGGAAGGAAATGAGGAAGATGAGTCACCCTTTGAGTTCCGAGCTTTGGAGGTAGCTTTAGAAGCCATTTGTAGCTTCCTTGCTGCGCGCACAACAGAATTGGAGATGGCTGCTTATCCTGCATTGGATGAACTTACCTCTAAGATTAGCAGCCGTAATTTGGACAGAGTTCGAAAATTGAAGAGTGCAATGACTAGGCTGACTGCTAGGGTGCAAAAGGTGAGAGATGAACTTGAACAACTACTAGATGATGATGATGATATGGCTGACCTCTACTTATCAAGAAAGGTGGCAAGCGCATCACCAGTTAGTGGATCACGTGGTGGCGGTGGTGCTTGGTTTGCTGCTTCCCCCACCATTGGATCAAAGATATCCAGAGCAAGTAGAGCAAGTTTAGTCACAGTTCATGATGAAAATGATGTGGAAGATCTTGAAATGTTACTCGAGGCTTATTTCATGCAAATCGATGGCACATTGAACAAATTAACCACGCTTCGAGAGTATATTGATGATACCGAAGATTATATCAATATTCAACTTGACAATCATCGAAATCAGCTTATTCAGTTAGAACTCTTCCTTAGCTCTGGAACTGTGTGCCTATCTTTCTTTTCGTTGGTGACTGCAATATTTGGCATGAACATTCCATATACCTGGAATGACAACCATGGTTACATGTTCAAATGGGTAGTTATTATCTCTGGAGCAATTTCTGCTGTTACATTTCTGTTGATTATTGCTTATGCTCGTAAGAAAGGGTTGGTTGGATCATGA 1185 0.4532 MARDGSVVPADPQAMAVVKKKTQSSRSWILFDASGKGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDDNVVPVVEELQRRLPQVGSGHQQEGDGKEFNVGQHDLEGNEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKVASASPVSGSRGGGGAWFAASPTIGSKISRASRASLVTVHDENDVEDLEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFFSLVTAIFGMNIPYTWNDNHGYMFKWVVIISGAISAVTFLLIIAYARKKGLVGS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211910g00007 394 Gene3D Magnesium transport protein CorA, transmembrane region 109 324 - -
Stsc211910g00007 394 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 392 IPR039204 -
Stsc211910g00007 394 MobiDBLite consensus disorder prediction 115 144 - -
Stsc211910g00007 394 Coils Coil 194 221 - -
Stsc211910g00007 394 Gene3D - 13 99 - -
Stsc211910g00007 394 Pfam CorA-like Mg2+ transporter protein 277 382 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc211910g00007 394 CDD Mrs2_Mfm1p-like 28 391 IPR039204 -
Stsc211910g00007 394 MobiDBLite consensus disorder prediction 129 144 - -
Stsc211910g00007 394 FunFam Magnesium transporter MRS2-1 16 99 - -
Stsc211910g00007 394 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 330 381 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211910g00007 Stsc-Chr211910 36408 41071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211910g00007 1 367 MRS2 Gene Family AT5G64560 79.946 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211910g00007 K16075 - gmx:100810239 652.129