Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211903g00007 ATGGAACCTCAACCCTACTTCTTGTTTATTGCAATTTTCGTCTTCCCTCTCTTCCATATTCTTTCAAAATATTTGAAACCAACAAAATCCATTAACCTTCCCCCTGGTCCATGGAAATTACCAATAATTGGTAACATCCATCAAGTTGCAAAAGCAGGACCACTACCACACCGTGCATTCAGAGAGCTTGCAAAGAAACATGGACCTATCATGCACCTCAAACTGGGTGAAAACTCCACACTAGTTATATCTTCCCCTAAGCTAGCCATGGAGGTACTCAAAACTCATGATGCCTCTTTTCAGAAGAGGCCTTTCATTTCTGCTGTTCCAACTCTAACATATGGCCCTACAGACATTGCATTCTCTCCCTCCGGAGATTACTGGAGAGAAATGCGAAAGATATGTACTCTTGAGCTTCTGAGTCTCAAAAGGGTTCAGTCTCTCGCTTCTGTAAGAGAAGCAGAGGCTGAAAAACTTGTCCAGAAGATTCGTGAATCTGCGGGTTCAGTCATCAATCTCACTGACTTGATTTTCTCCTTGATAAGCGCTTCTGTTTACAGGGCCACGTTTGGGAACTACAACAAGGATCATGATGAGTTTGTGCTTCTGATCAAACAAGTAATGGAAATCTTTGGAGGGTTTCATTGGGCGGATTTGTTTCCTTCCATAAAACCTTTGTATTACTTGAGTGGGATGAAGTCAAAGGTGGAGAAACTGCACAAGAAGCTTGATAGGATCTTGGAGGACATCATAATGGAGCACCAAAAGAAGCAAAGAGAAGGTAAGATCGATTTGGAAGACGAAGACCTTGTTGATGTTCTATTGAGAGTGCAGCAAAGTAGCAGTTTACAGACGAAGCTAACAATTGCAAACGTCAAAGCTGTCATTGGGGACATGTTTGCTGCTGGAACGGATACCACAGCTTCAACAATAGAATGGGCCATGTCAGAGATGATAACCAATCCAAGAGTTATGGCAAAGGCACAATCTGAATTAAGACAAGCATTCAAAGGAAAGAAAACAATTCATGAAACTGATATTGAAGAATTAAGTTACTTAAAGCTAGTTGTGAAAGAGACTCTAAGGTTACACTCACCAACTCCATTGTTGATCCCTAGAGAATGCACTGAAGAAACCAACATTCATGGGTATGATATACCAGTCAAGAGCAGAGTGATGGTGAATGTGTGGGCAATTGCAAGAGATCCACAATACTGGGATGATGCTGAGAGTTTTATACCAGAGAGGTTTGAAGATAGTTCTTTGGATTTCAAAGGGAACAACTTTGAGTATTTACCATTTGGGGCAGGAAGGAGAATCTGCCCTGGCATGGCTTTTGGTATTGCTAGCATTACACTTCCTTTGGCAATGTTACTTTACCATTTCAATTGGGAACTCCCCAATGGGATGAAGCCTGAGGATGTGGACATGACTGAACTCTCTGGCTTGGCAATTGGAAGAAGACATGCCTTGGATTTGATCCCCTCTGTTTATGATCCATCACTTCATGAAGATGATTAG 1521 0.4175 MEPQPYFLFIAIFVFPLFHILSKYLKPTKSINLPPGPWKLPIIGNIHQVAKAGPLPHRAFRELAKKHGPIMHLKLGENSTLVISSPKLAMEVLKTHDASFQKRPFISAVPTLTYGPTDIAFSPSGDYWREMRKICTLELLSLKRVQSLASVREAEAEKLVQKIRESAGSVINLTDLIFSLISASVYRATFGNYNKDHDEFVLLIKQVMEIFGGFHWADLFPSIKPLYYLSGMKSKVEKLHKKLDRILEDIIMEHQKKQREGKIDLEDEDLVDVLLRVQQSSSLQTKLTIANVKAVIGDMFAAGTDTTASTIEWAMSEMITNPRVMAKAQSELRQAFKGKKTIHETDIEELSYLKLVVKETLRLHSPTPLLIPRECTEETNIHGYDIPVKSRVMVNVWAIARDPQYWDDAESFIPERFEDSSLDFKGNNFEYLPFGAGRRICPGMAFGIASITLPLAMLLYHFNWELPNGMKPEDVDMTELSGLAIGRRHALDLIPSVYDPSLHEDD 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211903g00007 506 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 CDD CYP71-like 66 491 - -
Stsc211903g00007 506 SUPERFAMILY Cytochrome P450 32 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 FunFam Cytochrome P450 71D8 26 495 - -
Stsc211903g00007 506 Gene3D Cytochrome P450 27 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211903g00007 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Stsc211903g00007 506 PANTHER OS08G0105600 PROTEIN 59 500 - -
Stsc211903g00007 506 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211903g00007 Stsc-Chr211903 38448 41024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211903g00007 7 500 Cytochrome P450 AT3G26300 41.865 5.06e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211903g00007 - K15472 gmx:100783298 625.935