Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211903g00006 ATGTGCATCAGTGCAGGTAGTGCAAGGCCCAAAAATCAGAATGGCTATGTTGTAAATTCAGAGTCAGACTCAAAGAAAGCATTGACCACAATTGAAGATGTTCTAACAGGATTGGTAAAATGGCTTTGTGAGCAGTTGAAAAAACCTTCTCATCCTACACGGGGTGTTCCAACTGCCATCAATTGCCTGGCAACTCTACTTAAGGAACCTGCGGTTAGGTCTTCCTTTGTTAAGGAAGATGGAATCAAGTTGCTTGTACCTTTGATTTCTCCTGCATCCACCCAACAGTCTATTCAGCTTCTTTATGAAACATGCCTCTGTGTATGGTTCTTATCCTACTATGAACCGGCAATTGACTACTTGGCTACTTCAAGAACCCTTCCCTCTCTTGTTGATGTTGCCAAGAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGTGCTGACCTTTAAGAACTTGCTATCAAAAGGGAAATTGGCTGCTCAAATGATTGACCTTCAGCTGCCACAAGTTGTGCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGCAAGAAGTGCTCCTTGGCAACCTGGTTTGGTCTCCCATGCACAAAGATCCCATATTTTGGCGAGATAATATTGCCCATTTTGAAGAGAATGACTTCCAGATTATAAGGGTCCTAATAACAATTTTGGACACTGCTCGTGATCCAAGGACATTGGCTGTTGCTTGCTTTGACCTTTCGCAGTTCATCCAGCACCATCCTTCTGGGCGTCTCATTGTGGCAGACCTCAAGGCTAAGGAACGAGTAATGAAACTAATGAATCATGAGAATGCTGAGGTTACTAAGAATGCGCTGCTCTGCATCCAAAGACTTTTCTTAGGTGCAAAGTATGCCAGCTTCTTGCAGGCTTAG 897 0.4337 MCISAGSARPKNQNGYVVNSESDSKKALTTIEDVLTGLVKWLCEQLKKPSHPTRGVPTAINCLATLLKEPAVRSSFVKEDGIKLLVPLISPASTQQSIQLLYETCLCVWFLSYYEPAIDYLATSRTLPSLVDVAKSSTKEKVVRVVVLTFKNLLSKGKLAAQMIDLQLPQVVQSLKAQAWSDEQEVLLGNLVWSPMHKDPIFWRDNIAHFEENDFQIIRVLITILDTARDPRTLAVACFDLSQFIQHHPSGRLIVADLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211903g00006 298 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 7 183 IPR004908 GO:0000221|GO:0046961|GO:1902600
Stsc211903g00006 298 Pfam V-ATPase subunit H 25 183 IPR004908 GO:0000221|GO:0046961|GO:1902600
Stsc211903g00006 298 SUPERFAMILY ARM repeat 53 288 IPR016024 -
Stsc211903g00006 298 FunFam V-type proton ATPase subunit H 189 290 - -
Stsc211903g00006 298 Gene3D - 15 184 IPR011989 -
Stsc211903g00006 298 Pfam V-ATPase subunit H 184 287 IPR011987 GO:0000221|GO:1902600
Stsc211903g00006 298 Gene3D - 190 290 IPR038497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211903g00006 Stsc-Chr211903 31441 35163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211903g00006 7 298 Primary Pumps ATPases(2) AT3G42050 67.712 5.25e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211903g00006 K02144 - qsa:O6P43_024716 484.952