Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211901g00002 ATGAAGAGGGTGCTGTTGGTTCTTTTGTTTGTTGCTTTTGGTTCTCTTGTTATGGTTCGTGAGGCTTCTGCTAAGAGATGGCTTGTTGGTGATAACATGGGTTGGTCTACTAGTTATGGTGTCAACTACACTAATTGGGCCAAGGGAAAGCATTTCTACAATGGTGATTGGCTATTCTTTGTGTATGATAGAAACCAAATGAATGTTCTAGAGGTGAAGAAGACAGACTATGAAAGCTGCAATTCTGATCACCCTCTTCACAACTGGACCACCGGGGCCGGAAGAGACGTCGTTCCATTAAACGTGACTCGAAATTACTACTTCATCAGTGGGAAGGGATTCTGCTTTGGTGGCATGAAGCTAGCTGTCCATGTCGAGAAGCTGCCGCCACCGCAGAAGGCAGCCCCTGAAGTAGCTGGAGCACCATTGGCATTATACTCAAGAAGCCAGGTTGTTCTGTTGCCAGTTGTCTTAGCCGTTGGGGCAGCATGGGATGCATTCATTCATCTTTGGTAA 516 0.4632 MKRVLLVLLFVAFGSLVMVREASAKRWLVGDNMGWSTSYGVNYTNWAKGKHFYNGDWLFFVYDRNQMNVLEVKKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCFGGMKLAVHVEKLPPPQKAAPEVAGAPLALYSRSQVVLLPVVLAVGAAWDAFIHLW 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211901g00002 171 PANTHER BLUE COPPER PROTEIN 26 134 IPR039391 GO:0009055
Stsc211901g00002 171 Gene3D - 23 128 IPR008972 -
Stsc211901g00002 171 FunFam Lamin-like protein 23 128 - -
Stsc211901g00002 171 Pfam Plastocyanin-like domain 35 119 IPR003245 GO:0009055
Stsc211901g00002 171 ProSiteProfiles Phytocyanin domain profile. 25 127 IPR003245 GO:0009055
Stsc211901g00002 171 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211901g00002 Stsc-Chr211901 3740 6055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211901g00002 4 171 Phytocyanin Superfamily AT5G15350 50.296 2.89e-57 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211901g00002 - - mtr:11412511 264.233