Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211891g00002 ATGGAATCCAATAATGGTGAGGATTATACTCAAAATTTGCTTCTAGCTCAAACCCATGTATGGAATCAAATTTTCAGCTTCATGAACTCCATGTCTCTTAAATGTGCAATTGAATTGAACATAATTGATGTTGTTCACAATTATGGCCAACCCATGCCACTCTCAGAACTCATTGCTTCTTTACCAATCCACCCATCCAAAGCTACCTTCGTCCGCCGCTTGATGCGGATCTTGACACTTTCCGGCATCTTCTCTCAGCAAAATGATGATGAGCTTCCAGAAGAAGAGAGGTATGTGCTAACTAATGCATCTAGAATATTGCTTAAGGATCACCCTTTTTGCATGACACCATTCTTTCATGTGATTCTTGATCCAAAATTGTTAAAACCATGGTATCAACTCTCTAATTGGTTCAAGAAATGTGACAATAATATTTCACCGTTCGAAACCGAACATGGGATGCCATTTTGGGAATTTATTACTATTCACGACCCAAAGATTGGTAATGGTTTCCAAGATGCCATGACAAGTGACTCTGGAGTGGTTTCTAGTGTGGTAGTTGAGAAGTTTAAGGGTGTGTTTGAAGGGGTGGAATCTTTGGTTGATGTTGGTGGAGGGAATGGAACCATGGCTAAGGCCATAGCTAAATCATTCCCACATGTGGAGTGCATTGTGTTTGATCTTCCACATGTTGTTGCTGGCTTAGAAGGAAGTAGTGAGAACATGAAATATGTTGGAGGCAACATGTTTGAGGCAATTCCTTCTTCAGATGCTGTTTTGTTGAAGTGCATATTGCACAACTGGAATGATGAGGAATGTGTAAAACTCTTGAAGAAATGCAAGGAGGCAATAATAACGAAGAAGGGCAAAATAGGAAAAGTGATAATAATAGACATGGTGGTAGGGAATGATAATGGAGATAAAGGATCACTGGAAACACAAATCTTTTATGATATGGCGATGATGATCTTTGTCAACGGAAAGGAGAGAAATGAGAAAGAATGGGCCAACCTATTTTTGTCTTCTGGTTTCAATAATTACAAGATAATTCCAATTATGATGAGTTCAAGGTCCTTGATTGAAGTTTATCCATAG 1095 0.389 MESNNGEDYTQNLLLAQTHVWNQIFSFMNSMSLKCAIELNIIDVVHNYGQPMPLSELIASLPIHPSKATFVRRLMRILTLSGIFSQQNDDELPEEERYVLTNASRILLKDHPFCMTPFFHVILDPKLLKPWYQLSNWFKKCDNNISPFETEHGMPFWEFITIHDPKIGNGFQDAMTSDSGVVSSVVVEKFKGVFEGVESLVDVGGGNGTMAKAIAKSFPHVECIVFDLPHVVAGLEGSSENMKYVGGNMFEAIPSSDAVLLKCILHNWNDEECVKLLKKCKEAIITKKGKIGKVIIIDMVVGNDNGDKGSLETQIFYDMAMMIFVNGKERNEKEWANLFLSSGFNNYKIIPIMMSSRSLIEVYP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211891g00002 364 FunFam O-methyltransferase ZRP4 109 364 - -
Stsc211891g00002 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Stsc211891g00002 364 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Stsc211891g00002 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 364 IPR016461 GO:0008168
Stsc211891g00002 364 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Stsc211891g00002 364 Gene3D Vaccinia Virus protein VP39 108 364 IPR029063 -
Stsc211891g00002 364 PANTHER O-METHYLTRANSFERASE 16 348 IPR016461 GO:0008168
Stsc211891g00002 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 362 IPR029063 -
Stsc211891g00002 364 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Stsc211891g00002 364 Pfam O-methyltransferase domain 131 345 IPR001077 GO:0008171
Stsc211891g00002 364 Gene3D - 2 107 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211891g00002 Stsc-Chr211891 31323 34635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211891g00002 31 350 Monolignol Biosynthesis Gene Families AT5G54160 32.615 1.30e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211891g00002 - K16040 gmx:100781008 442.195