Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211890g00003 ATGGGGTGGTTGAGCTCTTACACCGCTGCAGTCGCACTACCTCTTGCTCCATCTTTGTACACCACCACTCAAAGTATTTTGTTCCAACAATTCCGAAACCCAGTCTTCCAATGCCACACCTTTTCAACTCTCTCTCTTACCACCCATCATCGTAAGCTACTGTCTGTGGCTCCAGCTGCACCTCCCTCCCAAGCGCAATGCGCTTCTTCAAGTGATGATTCTGATTTCGTGGTTGTCAATTTCTACCATTTTGTGTTTATCAAAGACCCACAAGCAGAAGTCGCCAAACATCTTTCCTTCTTGGAGGGTCTCAATCTTGACATCAATGGAAGAGTTTATTTGAATGAACAAGGGATTAATGCTCAGTTTAGTGGGCCATCGAAAGATGCACTGAAATATGTCAACTGGTTGAGAGAGGATAAGAGGTTTTCAGATATCCTGGTTCAGATATCTCCATCGCAAAATGGACATGCCTTTCCGAAATTGAAGTTGCGGTATAAGCCCTCGTTAGTACAGATTGAAGGTGGCATTTCACATCTTCCTTTGCTTGATCCGTCAATGCGGGCAATACCTTTAGAACCTTCAGAATGGAGAAATAGACTGGAACCAACCGATAAAAATGATCTTACACCAAAAGAATATCCTAAGAGGAATTACATTCTATTGGATGTAAGAAATGGTTATGAGTGGGACATTGGACATTTTAGTGGAGCTCAACGACCTAACGTAGATTGCTTTAGGAGTACTTCATTTGGTATGTCTCAACAAGAGATCTCTGCATCGGATCCTTTGTCAAATGTAGATAAAGAAAACACAAACATATTGATGTATTGCACTGGAGGAATTCGCTGTGATGTATATTCTACAATACTAAGGCAGCAAGGATTTCAGAATTTGTATACCTTGAAAGGAGGTGTTTCTCACTATTTAAAGAATGAAGGTCCTGCAAAATGGGTAGGAAATTTATTTGTATTTGACTCCCGTCTCTCTCTCCCTCCGTCTGTGTACAATCCCCAGGCCACAACTGAAGCAGACATGACGACCCCAATTTCTGGAGTTGATAAGTTTGCAAAATGCTACGTATGTAGTTCGGAAGTCAGTGAATTGAGACACAGGAATTGTGCAAATCTTGACTGTAATTTGCTATTTTTATGTTGCAGTCAATGTGTAAACGACCTAAGGGGATGCTGTTGTTTGAGTTGCACTACTGCCCCGCGGCTTAGACCTGTTCTAATTGGAGATTCCAGATATAAAAAGTGGCACATCTACCGTGACATGGATTTACAATGCAAAACATGA 1299 0.4165 MGWLSSYTAAVALPLAPSLYTTTQSILFQQFRNPVFQCHTFSTLSLTTHHRKLLSVAPAAPPSQAQCASSSDDSDFVVVNFYHFVFIKDPQAEVAKHLSFLEGLNLDINGRVYLNEQGINAQFSGPSKDALKYVNWLREDKRFSDILVQISPSQNGHAFPKLKLRYKPSLVQIEGGISHLPLLDPSMRAIPLEPSEWRNRLEPTDKNDLTPKEYPKRNYILLDVRNGYEWDIGHFSGAQRPNVDCFRSTSFGMSQQEISASDPLSNVDKENTNILMYCTGGIRCDVYSTILRQQGFQNLYTLKGGVSHYLKNEGPAKWVGNLFVFDSRLSLPPSVYNPQATTEADMTTPISGVDKFAKCYVCSSEVSELRHRNCANLDCNLLFLCCSQCVNDLRGCCCLSCTTAPRLRPVLIGDSRYKKWHIYRDMDLQCKT 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211890g00003 432 ProSiteProfiles Rhodanese domain profile. 215 318 IPR001763 -
Stsc211890g00003 432 CDD RHOD_YceA 192 311 - -
Stsc211890g00003 432 SMART rhod_4 201 315 IPR001763 -
Stsc211890g00003 432 Pfam Rhodanese-like domain 216 310 IPR001763 -
Stsc211890g00003 432 Gene3D - 64 171 - -
Stsc211890g00003 432 Pfam UPF0176 acylphosphatase like domain 77 168 IPR040503 -
Stsc211890g00003 432 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 215 332 IPR036873 -
Stsc211890g00003 432 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 69 416 IPR020936 -
Stsc211890g00003 432 Pfam Rhodanase C-terminal 320 402 IPR022111 -
Stsc211890g00003 432 Gene3D - 185 347 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211890g00003 Stsc-Chr211890 21531 25206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211890g00003 72 429 Sulfurtransferasese or Rhodanese AT1G17850 67.847 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211890g00003 - - gmx:100814358 639.802