Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211887g00006 ATGCTGTGTACCACAGCTGCAAGGCAGTTCCAAGTTGGTGACCACTTTGGTTGGCGTGTTCCTGATCCCACTGACACTGCATTCTACACTCATTGGGCTGAAAGAAACAGGTTCCAAGTTGGAGATTCTCTCGTATTTGAGTATGAAAATGACTCAGTTCTAAGTGTGGAGAAATTGGACTACTTTCACTGTGACACAAGCAACCCCATCACAGCCTTTGACAATGGCAAGAGCATTCTCAACCTAGACAACCCTGGTGCCTTCTACTTCATCAGTGGAACTGCTCATCACTGTAGCAGAGGCCAGAAGCTACTTGTGGAGGTTATGTCCCCACAACATCATCCAGTTCCAGTTCCAGAATCCCCACCACCCGCTTCGCTTCCACCGCAAGGTATCTCGCCGTCGTCGGTGTCTCCTTCGCCCGAAGCCTTCTCCCCGGTGCCTTCATCAACTTATGATAGCACAGATGAAGATTCAGCCTCTGTTATGCTTAATAGTTCAGCAGTTATTGCTCCCTTTGCTACATTTCTGGTTGTGTTACTCTTAGCATTCTGA 555 0.4811 MLCTTAARQFQVGDHFGWRVPDPTDTAFYTHWAERNRFQVGDSLVFEYENDSVLSVEKLDYFHCDTSNPITAFDNGKSILNLDNPGAFYFISGTAHHCSRGQKLLVEVMSPQHHPVPVPESPPPASLPPQGISPSSVSPSPEAFSPVPSSTYDSTDEDSASVMLNSSAVIAPFATFLVVLLLAF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211887g00006 184 MobiDBLite consensus disorder prediction 112 157 - -
Stsc211887g00006 184 FunFam Early nodulin-like protein 1 7 113 - -
Stsc211887g00006 184 Gene3D - 7 117 IPR008972 -
Stsc211887g00006 184 PANTHER BLUE COPPER PROTEIN 7 136 IPR039391 GO:0009055
Stsc211887g00006 184 ProSiteProfiles Phytocyanin domain profile. 8 110 IPR003245 GO:0009055
Stsc211887g00006 184 SUPERFAMILY Cupredoxins 7 109 IPR008972 -
Stsc211887g00006 184 MobiDBLite consensus disorder prediction 115 130 - -
Stsc211887g00006 184 MobiDBLite consensus disorder prediction 131 157 - -
Stsc211887g00006 184 CDD OsENODL1_like 8 109 IPR041846 -
Stsc211887g00006 184 Pfam Plastocyanin-like domain 25 102 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211887g00006 Stsc-Chr211887 23198 23949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211887g00006 1 126 Phytocyanin Superfamily AT1G79800 51.471 1.35e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211887g00006 - - adu:107461559 285.804