Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211885g00002 ATGAAAGGACAGCAGAGACCCTATGCGGTTGTGTTTGTGATACAAGCCATATATGCTGCTATGTTTCTTCTATCAAAAGCAGCATTCGACCATGGCATGAACAATTTCATCTTTGTCTTTTACAGACAAGCCATTGCAACCCTTTTTCTTATCCCTTTTGCTCTCTTCTTCGAATGGAAATCTGCGCCGCCTTTGCCTTTCCTCACCTTCTGCAAGATCTTCCTCCTTTCATTCTGCGGGATTACTTTGAGCTTGGATGTATATGGTATTGGTCTTATATACACCTCAGCAACGTTGGCTGCTGCCACCACAAACTGTCTTCCTGTTATCACCTTCTTCTTGGCGCTCCTTCTCGGGATTGAGAGTTTGAAATTAAAGACAGCACCAGGAATTGCTAAACTGATAGGCATTGGTGCATGCTTGGGTGGTGCAGCAACACTTGCCTTTTACAAGGGTCCTCATTTGAAATTTCTAAGCCATTATCACATTCTAAATTACCATAAAACCCAACAACAACAACAAGCTCATCACCATGCTCAATCTCATACATGGATAAAGGGCTGCTTCTTGATGCTCCTCTCCAATACCTTTTGGGGAATGTGGCTTGTACTACAGGCTTTTGTTATAAAAGGTTATCCTTCCAAGCTTCTTTTCACAACTCTTCAATGTTTCTTAAGTTCAATACAATCTTTTGTCATTGCCTTGGCCGTAGAAAGGAACATCGAGGAATGGAAGCTGGGTTGGAATCTCAGGCTCTTATCCGTAGTATACTGTGGGGTTATGGTGACGGGTGTGACATATTACTTACAGACATGGGTTATAGAAATGAAAGGACCTGTGTTTCTAGCAATGTCAACACCACTCAACCTCATTATCACAATCTTTGCCTCCGCACTTATCTTGGGCGACATAATTACTTTGGGGAGCCTGTTAGGAGGGTTGGCATTGGTTGTAGGACTGTACAGTGTGCTGTGGGGAAAAAGCAGGGAGCAAATGCCCAAAGCCTCACAAGACATGGAGCAAGTATCGGCTTAA 1035 0.4329 MKGQQRPYAVVFVIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAIATLFLIPFALFFEWKSAPPLPFLTFCKIFLLSFCGITLSLDVYGIGLIYTSATLAAATTNCLPVITFFLALLLGIESLKLKTAPGIAKLIGIGACLGGAATLAFYKGPHLKFLSHYHILNYHKTQQQQQAHHHAQSHTWIKGCFLMLLSNTFWGMWLVLQAFVIKGYPSKLLFTTLQCFLSSIQSFVIALAVERNIEEWKLGWNLRLLSVVYCGVMVTGVTYYLQTWVIEMKGPVFLAMSTPLNLIITIFASALILGDIITLGSLLGGLALVVGLYSVLWGKSREQMPKASQDMEQVSA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211885g00002 344 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Stsc211885g00002 344 Pfam EamA-like transporter family 8 132 IPR000620 GO:0016020
Stsc211885g00002 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
Stsc211885g00002 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 329 - -
Stsc211885g00002 344 PANTHER WAT1-RELATED PROTEIN 7 334 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211885g00002 Stsc-Chr211885 9820 15148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211885g00002 4 258 Nodulin-like Gene Family AT5G64700 61.089 6.21e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211885g00002 - - gmx:100804562 517.694