Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211885g00001 ATGCAACTCTTCCGTTTCTTCTTCTTGGAAGCGCTCTCTTCCTTCACCTTCTCCAACGTTAAACGATGTAAGGTAGTCCATGTCATCAAAGAGAGCTGCATAATCCCCGAAGCTTCTCTTTCTGTCTCAAGTATGGTGAGGGTTAGTGTTTTGAACGATGCTCTGAATAGCATGTACAATGCTGAGAAAAGGGGGAAGCGTCAAGTGATGATTAGGCCATCCTCCAAAGTTATTATCAAGTTCCTTATTGTCATGTAG 258 0.4302 MQLFRFFFLEALSSFTFSNVKRCKVVHVIKESCIIPEASLSVSSMVRVSVLNDALNSMYNAEKRGKRQVMIRPSSKVIIKFLIVM 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211885g00001 85 Gene3D - 45 85 - -
Stsc211885g00001 85 SUPERFAMILY Ribosomal protein S8 48 85 IPR035987 GO:0003735|GO:0005840|GO:0006412
Stsc211885g00001 85 PANTHER 40S RIBOSOMAL PROTEIN S15A 45 85 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211885g00001 Stsc-Chr211885 919 2288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211885g00001 45 85 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 95.122 9.25e-22 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211885g00001 K02957 - msin:131218932 81.6481