Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211882g00001 ATGGAGATTGCTCAGGTCGGTGTGAGGACAAGAGCTCAAGCTGCGTTAGCCATGCGAGCTGCCACGTCACCTCCAACATCACCGAAGAGAAGGAAGATCAACAAAGCCAGGAGCAGTAACGAAGAGAGAAAATTCTCAACGGCGTCGTCTTCAGCAATCGTTAGGATCGGGAGTAGGAGGAGAAGCGCCTCTTCCGTGGTTGAGGCAGCTCTTCCGGAGGCGGCGACGGAGGAAAGGTGCTCTAGCCCTAACTCCGGTGAATTCCCGGCGTCTTGTTGTTGCAGCAATGGATCCGTTGGGCTTGACAAGGAGAGGATCGAATTGTCAGATCTGGAGGTGGAGAGCGCGCAAGTTGAAACATCTACGTGCGATTGCGGTGATGAAACTGATGAGAGGAGAGAGATGAGCCATCGAGGAAGAGACAATTCACAAGAGGTAGAGTCAGTGGAGACCGATTCTCGCCGAAGTTCATCAATGGCGCAAAACATGCCAACGGAGTTGGAGATGGAGGAATTCTTCACCGCCGCAGAGAAAGACATTCAGAAAAGGTTTCAGGAGAAGTATAACTATGATATTGGGAATGACGTGCCGTTGGAAGGACGCTACGAGTGGGTTGAGTTGAAGCCATAG 630 0.5175 MEIAQVGVRTRAQAALAMRAATSPPTSPKRRKINKARSSNEERKFSTASSSAIVRIGSRRRSASSVVEAALPEAATEERCSSPNSGEFPASCCCSNGSVGLDKERIELSDLEVESAQVETSTCDCGDETDERREMSHRGRDNSQEVESVETDSRRSSSMAQNMPTELEMEEFFTAAEKDIQKRFQEKYNYDIGNDVPLEGRYEWVELKP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211882g00001 209 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 208 IPR044275 GO:0004861|GO:0045736|GO:0051726
Stsc211882g00001 209 MobiDBLite consensus disorder prediction 43 58 - -
Stsc211882g00001 209 MobiDBLite consensus disorder prediction 125 152 - -
Stsc211882g00001 209 Coils Coil 101 121 - -
Stsc211882g00001 209 MobiDBLite consensus disorder prediction 119 163 - -
Stsc211882g00001 209 PIRSF CKI_KRP_plant 3 209 IPR044275 GO:0004861|GO:0045736|GO:0051726
Stsc211882g00001 209 Pfam Cyclin-dependent kinase inhibitor 163 207 IPR003175 GO:0004861|GO:0005634|GO:0051726
Stsc211882g00001 209 MobiDBLite consensus disorder prediction 15 65 - -
Stsc211882g00001 209 Gene3D p27 159 209 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211882g00001 Stsc-Chr211882 6201 7455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211882g00001 164 209 Core Cell Cycle Gene Families AT1G49620 69.565 1.17e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211882g00001 - - gmx:547743 213.001