Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211879g00003 ATGGCCAAGCACCAATTAGATCTCGCCGATCGCCGCAGCTCCACAACCAACACCAAGCTCCGTCGTCACCATGACACTCATCATCAAACTCGTCAAGGTCTTCGTTCTCGCTACCTTGCCTTCAACAACATGATTAATGATGAGAGGGACGAAATTGCAAGGGCTGACTCCGTCAAGTTTGATTTGGTATTTGGCGAAATGGAGAGGTTGCATCAACTAGTTACAAAACCAAGAGAACAAGTTGCTGATGCAAAGGCTCTGTTGGACATAACCAAATGCTTGGTAATGTCTGTGAAGGGTCATGCTAATGGTGGAGTCACTCCTTCAGAATTTGTGTCTCGTATTCTTGAAGAATTCGGTCAACATGGTGGACTTAGTACTGGCACAGAAGGTTGCACCAGAAACTCAATAGCTTGGAATGATGTTGGACTATCAGTATCACATATTTTTAAAGCGGGTTCTGGCTGCTCTACAATGAATGGCCTCATTTATGCTAGAGCAAGGCAGAGGAAGGCTGTTAATCGTAGAAGTAGGAAGCGTGTAAGGCCCAATGAATTGGCCCGGCCGGAAGAGCTTGGCGGAAGTCCAAGAGCAGAGAGAGCTGATACAGATAAAAATATGTTAACGATGTTTAATATCTTAAGGGAAAATAGGGTTGTTAGGCTTGAGAATCTGATTTTGAATAGGAACTCCTTTGCTCAAACAGTGGAGAATTTATTCGCATTATCATTCTTAGTCAAAGATGGACGGGCTGAAATCAAACTCAATGAGGCTGAATTGCAGCTAGTCGTATCACCTAGAAATGCCCCTCGTGCAAATGCAGTTCGTGCTGGGGATGTTGCTTTCAGTCACTTTGTGTTCAGGTTGGATTTTAAGGACTGGAAGCTGATGATCGACTCTGTTGGGGTTGTGGAGGATCTAATGCCTCATAGAGAATAG 939 0.4441 MAKHQLDLADRRSSTTNTKLRRHHDTHHQTRQGLRSRYLAFNNMINDERDEIARADSVKFDLVFGEMERLHQLVTKPREQVADAKALLDITKCLVMSVKGHANGGVTPSEFVSRILEEFGQHGGLSTGTEGCTRNSIAWNDVGLSVSHIFKAGSGCSTMNGLIYARARQRKAVNRRSRKRVRPNELARPEELGGSPRAERADTDKNMLTMFNILRENRVVRLENLILNRNSFAQTVENLFALSFLVKDGRAEIKLNEAELQLVVSPRNAPRANAVRAGDVAFSHFVFRLDFKDWKLMIDSVGVVEDLMPHRE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211879g00003 312 MobiDBLite consensus disorder prediction 173 201 - -
Stsc211879g00003 312 PANTHER UNCHARACTERIZED 13 311 IPR027786 GO:0005634|GO:0006281|GO:0030915
Stsc211879g00003 312 MobiDBLite consensus disorder prediction 179 201 - -
Stsc211879g00003 312 MobiDBLite consensus disorder prediction 1 20 - -
Stsc211879g00003 312 Pfam Nse4 C-terminal 220 307 IPR014854 -
Stsc211879g00003 312 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211879g00003 Stsc-Chr211879 14550 16915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211879g00003 31 312 Non-SMC Element family AT1G51130 51.064 1.84e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211879g00003 K22825 - gmx:100781485 376.711