Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211872g00001 ATGATGCAATCACTTCGCTTGATTAGAGAAGAAGAAGTCACCAAATTGGTCAACAATTTACGTGAAGAAGCATTAATAAATACTAGTAGCGGTGTGAATCTAAGTGAGATGATTCTTGATACATTAAATAGTATCATTTGTAAGTGTTCACTTGGATGTAACACACAAGATTATCGTTATGAAAGTGCAAAAGGGATAGCAAGAAAAGTGATGATCCAACTTGGAGTTATTACTTTGGGTGATCACTTTCCTTGGTTGTGTTGGGTTGATGTTCTTAGCGGAAAAATTCAAGAATTGAAAGACACTTTTGGAGCAATGGATGCACTTCTTGATGAGATGATTGCAAAGCACAAGAAGACGAGGATAGAAGATCATGTGAAAAGCTTTGTGGATATTCTCATCCAACTCCAAGAGGATGGGCACTATGACCTCTCAAATGAGGATATTAAAGCAATTATAACGGACATGTTTGCCGCAGGAAGTGCTTCAAATTCAGCAGTAATAGAATGGGCAATGGCGGAGTTACTGAAAAATCCAATGACATTGAAGAAAGCACAGGAAGAGGTTAGAAGGATTGTGGGGCAAAAATCTAAAGTAGAAGAGAGTGATATCAACAAAATGGAGTACTTAAAATATGTGGTGAAAGAAACAATTAGATTGCATCCACCAGCACCTTTGTTGGTTCCTAGAGAAACATCAACTAATGTGAAACTCGAAGGTTACGACATTCCTGCAAAAACAATGGTATGTGTGAATGTATGGGGTATACAAAGAGATCCAGAATATTGGGAAAGGGCAGAAGAGTTCATCCCAGAGAGACATGAAAAGATGAAAGTTCGTTACAATGGTCAAGACTCCCAATTTGCATCATTTGGTTTTGGGAGAAGAGGATGTCCTGGAATGAGTTTTGGAATTGATTCTGCTGAGTATTTGCTTGCTAACCTTCTTTGTTGCCTCAATTGGGAGATGGTGGCTTCTCCACAAAGTATTATTGACATGACCCACACACACGGGATACTTGCTTTCAAGAGATTCCCACTTCATCTTAAGCCAATCCCATTCTTATTCAAATAA 1074 0.3845 MMQSLRLIREEEVTKLVNNLREEALINTSSGVNLSEMILDTLNSIICKCSLGCNTQDYRYESAKGIARKVMIQLGVITLGDHFPWLCWVDVLSGKIQELKDTFGAMDALLDEMIAKHKKTRIEDHVKSFVDILIQLQEDGHYDLSNEDIKAIITDMFAAGSASNSAVIEWAMAELLKNPMTLKKAQEEVRRIVGQKSKVEESDINKMEYLKYVVKETIRLHPPAPLLVPRETSTNVKLEGYDIPAKTMVCVNVWGIQRDPEYWERAEEFIPERHEKMKVRYNGQDSQFASFGFGRRGCPGMSFGIDSAEYLLANLLCCLNWEMVASPQSIIDMTHTHGILAFKRFPLHLKPIPFLFK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211872g00001 357 PRINTS P450 superfamily signature 289 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PRINTS P450 superfamily signature 159 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PRINTS P450 superfamily signature 212 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PANTHER CYTOCHROME P450 71B11-RELATED 2 352 - -
Stsc211872g00001 357 Coils Coil 182 202 - -
Stsc211872g00001 357 Pfam Cytochrome P450 4 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 291 300 IPR017972 GO:0005506|GO:0016705
Stsc211872g00001 357 Gene3D Cytochrome P450 1 352 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PRINTS E-class P450 group I signature 148 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PRINTS E-class P450 group I signature 168 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PRINTS E-class P450 group I signature 288 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PRINTS E-class P450 group I signature 298 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 PRINTS E-class P450 group I signature 252 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211872g00001 357 SUPERFAMILY Cytochrome P450 2 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211872g00001 Stsc-Chr211872 6917 9324 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211872g00001 1 351 Cytochrome P450 AT3G48300 38.310 4.66e-79 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211872g00001 K20617 - gmx:100785621 430.639