Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211869g00004 ATGGCTGAGAGATTTGATCGGATAGCTGATATTCATCAGAGGAAAATGCATTGGAACATCCAAGTTTATGTGATACGGATGTATGAAGTCCCAAGCTATGATGATCGTTCGGGCGTTAGGATTCACTCTTCAATTCCAAAGAAACTGATGAGCACTTGGGGTCCTAGGCTCAAAGAGTTCAACATGCACAACATGAGGAACTTTGTGATAATGGACAAGAGGCTCAAGGTTAAAGCTACTCAAATAAGCTGGACACTGTCATTCTGTAACAGAATTGAGGTGGATGAGGTGGATGAGGTGGATCTCCCTACGTTCCCTTTGGAACCATTTTCATTTCGCACAATACCGGAGATTCTCAACCCTCTCGCTGTAACTGAAACTGAACTATTTGATTTTGTGGCTGAAGTTGTGGGAAAGGAGGATCCTAGAGATCTGACCACAAGCAAGGGGCTGGATACAAAGAGGATGGCCATCAAATTGCAGGACTTAGAGAAGAATAGCATGCGTTGTGTGCTGTTTGGTTCATGCGTTGATGAGATAATGCCGCTGATAACAGAAGATAGGGTTGAACCGCTTATTGTTGTGCTGCAGTTCTTCAGGGTTAATCGATGGGACGGAAAGACATCCATTCAGAGCCATTTCGACATTTCAAAAGTTTGTGTTGACGCAATACTCAGTGATATTGTTGAGTTCCGAAACAGTTCTGTGCGGATTACTCAAATGCCTACACAGAGCAGTGGCCCTGGGATTGAACAATTGAGACGTGGTCAAGTTGAAATAAAGTCAATTGAGGATGCATGGAATTCAACAGAGGAGGGTAAAATATGGATTGCTGGAAAAATCCTCTCTATTACCTCTGGCAAGAATGACTGGTGGTACAAAGCTTGCGATGTTTGCCCAAAGAAGGTTGATCCTAAAGAAGGGGGTATGTGGGAGTGCAAGAGATGTGAAAAGATAACCAAGAGTTACACCATCAGAGCCTGA 984 0.436 MAERFDRIADIHQRKMHWNIQVYVIRMYEVPSYDDRSGVRIHSSIPKKLMSTWGPRLKEFNMHNMRNFVIMDKRLKVKATQISWTLSFCNRIEVDEVDEVDLPTFPLEPFSFRTIPEILNPLAVTETELFDFVAEVVGKEDPRDLTTSKGLDTKRMAIKLQDLEKNSMRCVLFGSCVDEIMPLITEDRVEPLIVVLQFFRVNRWDGKTSIQSHFDISKVCVDAILSDIVEFRNSSVRITQMPTQSSGPGIEQLRRGQVEIKSIEDAWNSTEEGKIWIAGKILSITSGKNDWWYKACDVCPKKVDPKEGGMWECKRCEKITKSYTIRA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211869g00004 327 Gene3D - 104 239 IPR012340 -
Stsc211869g00004 327 Gene3D - 6 99 IPR012340 -
Stsc211869g00004 327 Gene3D - 240 327 IPR012340 -
Stsc211869g00004 327 SUPERFAMILY Nucleic acid-binding proteins 110 234 IPR012340 -
Stsc211869g00004 327 CDD RPA1_DBD_B_like 152 232 - -
Stsc211869g00004 327 SUPERFAMILY Nucleic acid-binding proteins 259 325 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211869g00004 Stsc-Chr211869 22615 25020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211869g00004 104 318 Core DNA Replication Machinery Family AT4G19130 23.913 6.03e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211869g00004 - - aip:107635329 319.701