Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211865g00004 ATGGGGTCCTGCTTCTCTTTGGAAAGCAGGGGCCCCAATTCACCATCTTCAGGATTCAGCAGGAAGAGGAGGAATTCCAAGAAGAGGATTGGGTCAAGAAGCTCCTCATTTGAGTATTGGAGGAATGAGCCTCTCCATAGGGTCGCTGGTAGGATCTTCCTCAATGGTTCTTCCCAATTTGCTTCCTTGTTTACCCAGCAAGGAAAGAAAGGCACCAATCAAGATGCCATGATTGTTTGGGAGAACTTTTGTTCCAGACAAGATACTGTTTTCTGCGGTGTTTTCGATGGCCATGGTCCGTTTGGTCACATGGTTGCGAAAAAAGTGAGGGATGTTCTCCCCCTAAAACTGAATGCTCATTGGGAAGCTAATGTATCTGGCGACGATGTCCTCAAGGAGATTAGTGTGAATACCACAGTGAGCATGAACTCTGAAGAGGCCTCCTCGTTTGTATCCGCTGACGAGGAATCCAGAGCATCCATTGATGCCGAAGAATTGGAAAAATACCCTGAAATCTTTCAAACTCTTAGGGAGTCTTTTCTGAAGGCCTTCAAAGCTATGGATAGAGAATTGAAGACACACCCTAGTGTCGATTGCTTCTGCAGTGGAACAACAGCAGTAACATTCCTGAAACAGGGCCACGATCTTATTGTTGGAAATGTTGGTGATTCTAGAGCTGTGCTTGGTACAAGAGAGAATGATAATTCTCTTGTTGCAGTTCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCCGAAGCCGAGAGAATTCGTAGATGTAAAGGCCGTGTTTTCGCCCTTCATGATGAACCAGAAGTTGCTCGAGTCTGGTTGCCAAATAATGACTCCCCTGGCCTTGCCATGGCTCGAGCATTCGGAGATTTTTGTCTTAAAGATTTTGGTTTGATATCTGTTCCAGAGGTTTCATACCGAAGACTCACCGAGAAGGATGAGTTTATCGTCTTAGCAACAGACGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTAGACATAGTAGCAGCAGCACCATCGCGGTCCACAGCGGCTCGAGCTCTGGTCGAGTCTGCTGTTAGAGCTTGGAGATACAAATATCCAACTTCCAAGGTGGATGACTGTGCAGTGGTTTGCCTCTTTCTGGACCAGGATTTGCATAAAATCTCCAACACTTCCTATGCTAAGTCCAAAGAGCAGCAGAGTTCCGGGATCGAAGCAAACGGTGACAGCGAAGAAGTGGAAGCTATTCCGGAACCTGCCGGTCTGGTAAGGTCCGGAACATGCAGGGAAGTCAACAATGACACATCCAATGGCGAAAGCAATGATGAAATGCTCAAAGATGATGTGATGGATGCTGCAGAGTACTCTGCACTTCAAGGAGTGACTCGAGTGAACACACTCTTGAATCTACCGAGATACGAACCTCGCAAGGACAAGGGTGTGGCTGCCAGCCCGAAGAAGCGCAAATGA 1467 0.469 MGSCFSLESRGPNSPSSGFSRKRRNSKKRIGSRSSSFEYWRNEPLHRVAGRIFLNGSSQFASLFTQQGKKGTNQDAMIVWENFCSRQDTVFCGVFDGHGPFGHMVAKKVRDVLPLKLNAHWEANVSGDDVLKEISVNTTVSMNSEEASSFVSADEESRASIDAEELEKYPEIFQTLRESFLKAFKAMDRELKTHPSVDCFCSGTTAVTFLKQGHDLIVGNVGDSRAVLGTRENDNSLVAVQLTVDLKPNLPAEAERIRRCKGRVFALHDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAAAPSRSTAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDQDLHKISNTSYAKSKEQQSSGIEANGDSEEVEAIPEPAGLVRSGTCREVNNDTSNGESNDEMLKDDVMDAAEYSALQGVTRVNTLLNLPRYEPRKDKGVAASPKKRK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211865g00004 488 CDD PP2Cc 59 380 IPR001932 -
Stsc211865g00004 488 PANTHER PROTEIN PHOSPHATASE 33 378 IPR015655 GO:0004722|GO:0006470
Stsc211865g00004 488 MobiDBLite consensus disorder prediction 1 20 - -
Stsc211865g00004 488 ProSiteProfiles PPM-type phosphatase domain profile. 60 380 IPR001932 -
Stsc211865g00004 488 MobiDBLite consensus disorder prediction 392 446 - -
Stsc211865g00004 488 SUPERFAMILY PP2C-like 54 381 IPR036457 -
Stsc211865g00004 488 SMART PP2C_4 51 378 IPR001932 -
Stsc211865g00004 488 MobiDBLite consensus disorder prediction 392 406 - -
Stsc211865g00004 488 MobiDBLite consensus disorder prediction 1 30 - -
Stsc211865g00004 488 Gene3D - 56 383 IPR036457 -
Stsc211865g00004 488 FunFam probable protein phosphatase 2C 33 55 383 - -
Stsc211865g00004 488 Pfam Protein phosphatase 2C 174 359 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211865g00004 Stsc-Chr211865 33385 36606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211865g00004 1 476 PP2C-type Phosphatase Gene Family AT3G02750 62.172 0.0 590