Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211864g00005 ATGGCTCTCCAACTCCAATCTTCCTTCTCCTCTTCTTCCACCCATTCTACTCCTTCTTCCTCCTCCTCTTTCAACCATGCCTACAAATATGATGTGTTTATTAGTTTCAGAGGTGAAGATACTCGCTATGGTTTTACCGGCTATCTTTATGAAGCTCTTTCTAATAAAGGAATCCATGCTTTCACTGATGATGAGGAGCTTCATAAAGGGAACGAAATCACACCCTCACTTCTCAGCTCAATTCAAGATTCTAGGATTGCCATCATTGTCCTTTCTCCTAACTATGCTTCTTCTTCTTTTTGCTTGGATGAGCTTGTCCAAATCCTTCACTGCATCAAGGGAAATCATCGGTTGGTTTTGCCGGTTTTCCATAACGTTGATCCTTCTGATGTTCGCCATCTTAAAAAGAGTTTCGGAGAGGCGATGGCTAAGCATGAGGAGAGATTCAAGAGTGACATGAACAAGGTGCTCAAATGGAAGAAGGCTCTCCATCGAGTAGCTAAGTTGTCCGGCTATCATTTCAAAGATGGGGATGGATATGAACATAAGTTTATTAGAAATATTGTGGAAAACATTTCAAGAAAGCTTAGGTTTGTACCTTTGCCTGTTGCTGATTACCCTGTTGGACTAGAATCTCGAGTACCAAAAGTAATTTCCCTTTTGGAAATGGATTCTAGTGATCGAGTTCACATGGTAGGGATACATGGAATTGGTGGCATAGGAAAAACAACACTTGCTCTTGCGGTTTATAACCTGATTGCTAACAATTTTGAAGGTGTGTGCTTTCTTGAAAATGTCAGAGAAAATTCAAAGAAATACGGGTTTGTACATCTTCAAAATATCCTTCTTTCTAAAATAATAGGGAAGGATGAAGTCCATATTGTAGGTGTTAAAGAAGGAACCTCACAGATACAACAAAGGCTTCGCCGAAAGAAGGTTCTTTTGGTTCTGGATGATGTTGATGATTGCAGTCAGCTACAGGCTGTTGCTGGAAAACATGATTGGTTTGGTCCTGGCAGCAGAGTTATTATTACAACACGTGACACACATTTGCTAAAATGTCATGGTGTTCGAGATACATGTGAGGTACACGATTTAAACAAGGATGACTCTTTTCAATTGCTTATTAAAAAAGCTTTTGAAAATGACAATGTTAGCCCAAGTTACGCAGATGTTTTAAATCGTGCAATAGCTTATGCCTCGGGACATCCACTGGCTTTGGAAATAATAGGCTCCAACTTGTTTGGAAAAGAAGTACAAGTTTGGGAATCTGCATTGGATCATTTTGAAAAACATCTCGACAATAAAATGCATGAGATACTTCGAGTAAGTTTTGATTCTTTGGGAAAAGTAGAGCAAAGTGTTTTCCTTGATATTGCTTGTTGTTTTAAAGGGTATTCATTAGGGGAAGTTACAGCTCTACTTCAAGCTCATTATGGGAGTTGCATGGAATATCATATTGGAGTGTTGGTTGAAAAATCTCTCTTAAAGACTGATACATGGGATGGAAGTGTGACAATGCATGATTTGATAGAAGACTTGGGCAAAGAAATTGATTTTGAAAAATCACCAGAAACACCTGGAAAACGTAGTAGATTATGGTTCTACTTAGATATAGTTAAGGTCTTAGAAGATAATCAAGGTACTAGCGCCGTTGAAATTATATATTTGGAGTTTCCGTTGTTTAATAGTGAAGAAGTGAAATGGGATGGAAAAGCTTTTAAAGAGATGAAAAATCTCAAAACACTTATCATAAGAAATGGTTGTTTCTCTAAAAGTCCCAAACATCTTCCAAACAGTTTAAGAGTATTGGAATGGTGGAGATATCCTTCAGAGTATTTTCCATATGATTTTCAACCAAAGGAGCTCTCTATTCTCAAGTTACATGATAATCACTTTCTGTCATCAAAGTTTTATAGCTTATTTAAGGTGTGTGCTCATAATTGGAGGTGGTGGTGGAGGAGATTGCGAAGTCAGGTGGAGTTGAATGGAGAGAAAGGGGAGAGTGGAATGATGATGGGGTATAAGCTGGGGAGCTTGAAAGTTTTGGAATTGGAAATATGTGATTCTTTGAAAGAAATACCTGATGTATCTAATCTTCAAAATTTAGAAAAGCTTTTGTTCAGAAGATGTAGCAATTTAGTTAGAATTCACCGTTCAGTTGGTTTTTTAAATAAACTTAAAACATTAAAAGCTACTGATTGCAAAATGCTGAGGAGTTTTCCACCTGCTATCAAATTGCCCTCGTTGGAACGACTCATTCTACGTGGTTGCTCAAGCCTTAAGTATTTTCCAGAAATTCCAGAAGAGATGAAAAACGTGAAATTGGTGAATTTGAATAAGACTAGCATAAAAGATTTGCCATGTTCATTTTGTAATCTTTCTGGACTGAGGCGTTTGGAAATGATAGGGGATGAAATGTATAAGATACCACGTGTCATTACCATGATGCCGCAACTGCGTAATTGTAAGATTGGTGGAGAAGGCAATAAGTGGCGGCGGGAACGACCATTTCGGCTGGATTTGCTTCTAAAAAAGGCTATTTACTCAAATTGGATATATGGTCGTTTCCAAAACATGAATTTGTCAGATGATTTTTTTCCAATAGCTGTTGCATGGTTTCCCAATGTCTCATCTTTAAGCTTAAGTGGCAATGATTTCACAGTCCTTCCTCAATGCATCCAACAATTTCACCTTTTAAGATACCTTAAAGTGGATGCTTGCAAGCATCTTCGGGAGATTAGAGGAATTCCACCAAAATTGGAACGCTTCTTTGCTGTAAACTGCAAATCGTTGAGTCTGGGGGGCACAAACGTGTTACTCAATCAGGAAGCGCATGAGGGTAGAATTACCCAATTTGTGATGGCATGTAGCATTATTCCAAGGTGGTTTGAGCAGCGCTGCAGTGGAGCTTCTATTTCTTTCTGGTTTCGTGGCACTGAATTCCCTGACAATGCTCTTTGTGTAGCAATTTTACTCAAAGATTATATCTCTGTCCCAGTTCAAGTAAGGCTCTCCGTCGCAATAAGTGGCAACCGAGTTTACAGTTCAGTGCCTATGGCCGTCAACGTGAATCAATTTTTTATTTTTAATCTGAATTTACAAACTAATCATCTAACTTTGGAAAAAGGGTGGAATCACATGGAGGTTTCATATAAAGTACATGACGAAAGTGGCAGGGAGGTCCCAAGTATTGAGTTTTTTGCAAAAGAGATTGGAGTGCATGTATGGAAACCAAAGATCATTCAAGATATTCGATTCACTGATCCTTACAAAATGACACAATTAATTATGATGATGATGATGATGATGCTTTCAATGGTATTCTCCAACCATAAGAAGCAGCCCTTGCTCATGGAAACATGCATTGGTTTGTGGACATTACTCTTTCTCTCACACTCTTTTTTTGAATAA 3414 0.3828 MALQLQSSFSSSSTHSTPSSSSSFNHAYKYDVFISFRGEDTRYGFTGYLYEALSNKGIHAFTDDEELHKGNEITPSLLSSIQDSRIAIIVLSPNYASSSFCLDELVQILHCIKGNHRLVLPVFHNVDPSDVRHLKKSFGEAMAKHEERFKSDMNKVLKWKKALHRVAKLSGYHFKDGDGYEHKFIRNIVENISRKLRFVPLPVADYPVGLESRVPKVISLLEMDSSDRVHMVGIHGIGGIGKTTLALAVYNLIANNFEGVCFLENVRENSKKYGFVHLQNILLSKIIGKDEVHIVGVKEGTSQIQQRLRRKKVLLVLDDVDDCSQLQAVAGKHDWFGPGSRVIITTRDTHLLKCHGVRDTCEVHDLNKDDSFQLLIKKAFENDNVSPSYADVLNRAIAYASGHPLALEIIGSNLFGKEVQVWESALDHFEKHLDNKMHEILRVSFDSLGKVEQSVFLDIACCFKGYSLGEVTALLQAHYGSCMEYHIGVLVEKSLLKTDTWDGSVTMHDLIEDLGKEIDFEKSPETPGKRSRLWFYLDIVKVLEDNQGTSAVEIIYLEFPLFNSEEVKWDGKAFKEMKNLKTLIIRNGCFSKSPKHLPNSLRVLEWWRYPSEYFPYDFQPKELSILKLHDNHFLSSKFYSLFKVCAHNWRWWWRRLRSQVELNGEKGESGMMMGYKLGSLKVLELEICDSLKEIPDVSNLQNLEKLLFRRCSNLVRIHRSVGFLNKLKTLKATDCKMLRSFPPAIKLPSLERLILRGCSSLKYFPEIPEEMKNVKLVNLNKTSIKDLPCSFCNLSGLRRLEMIGDEMYKIPRVITMMPQLRNCKIGGEGNKWRRERPFRLDLLLKKAIYSNWIYGRFQNMNLSDDFFPIAVAWFPNVSSLSLSGNDFTVLPQCIQQFHLLRYLKVDACKHLREIRGIPPKLERFFAVNCKSLSLGGTNVLLNQEAHEGRITQFVMACSIIPRWFEQRCSGASISFWFRGTEFPDNALCVAILLKDYISVPVQVRLSVAISGNRVYSSVPMAVNVNQFFIFNLNLQTNHLTLEKGWNHMEVSYKVHDESGREVPSIEFFAKEIGVHVWKPKIIQDIRFTDPYKMTQLIMMMMMMMLSMVFSNHKKQPLLMETCIGLWTLLFLSHSFFE 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211864g00005 1137 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 172 IPR035897 -
Stsc211864g00005 1137 Gene3D Ribonuclease Inhibitor 568 773 IPR032675 -
Stsc211864g00005 1137 SMART till_3 29 169 IPR000157 GO:0007165
Stsc211864g00005 1137 FunFam Disease resistance protein (TIR-NBS-LRR class) 26 198 - -
Stsc211864g00005 1137 Gene3D - 28 193 IPR035897 -
Stsc211864g00005 1137 Gene3D - 365 449 IPR042197 -
Stsc211864g00005 1137 Pfam NB-ARC domain 213 441 IPR002182 GO:0043531
Stsc211864g00005 1137 PRINTS Disease resistance protein signature 231 246 - -
Stsc211864g00005 1137 PRINTS Disease resistance protein signature 675 691 - -
Stsc211864g00005 1137 PRINTS Disease resistance protein signature 400 414 - -
Stsc211864g00005 1137 PRINTS Disease resistance protein signature 307 321 - -
Stsc211864g00005 1137 ProSiteProfiles TIR domain profile. 28 196 IPR000157 GO:0007165
Stsc211864g00005 1137 SUPERFAMILY L domain-like 562 934 - -
Stsc211864g00005 1137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 745 IPR044974 GO:0006952
Stsc211864g00005 1137 MobiDBLite consensus disorder prediction 1 23 - -
Stsc211864g00005 1137 Pfam TIR domain 29 196 IPR000157 GO:0007165
Stsc211864g00005 1137 SUPERFAMILY "Winged helix" DNA-binding domain 436 544 IPR036390 -
Stsc211864g00005 1137 Gene3D - 194 358 IPR027417 -
Stsc211864g00005 1137 Gene3D Ribonuclease Inhibitor 774 943 IPR032675 -
Stsc211864g00005 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 459 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211864g00005 Stsc-Chr211864 36375 40651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211864g00005 24 827 WRKY Transcription Factor Family AT4G12020 28.727 4.56e-65 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211864g00005 - - aip:107644584 1351.65