Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211859g00006 ATGAGAGTTCCCGTTTCGTCATCCCCACAGGCTAACAATAATACAACATCAAACCCAAAACCGGTTGAAAGCCTCTCCACAAATATTCAAAGCATTCCAAACAACACAAGCACGCTGTGCTACGAGCCCACATCGGTGCTGGACCTGTGCAGGAGTCCCACACCTGAGAAGCCAGCAGGCCTGGTGGCTAATAATAACTCACAGCAAGAGTGTGTGGAGGACCAGCTGGAGGACCATGTGCTTCACAATCTTGATTGGGACTCCATCATGAAGGACCTTGGCTTCCACGAAGACTCAAACCCACCCTTGTTCAAGACCATGCTTCACCCAACCACCACCACCACACTCCCAAATGTCCCTGACTTCCCTCCTTCCCACGACCCTTCCTCCTTCGATCCACACTCCGAATTCCCAGACATACATAATACCATGCCTTACAACTACGCCAACGCCAACGCCACCCTTGACCACCTCCTCCACGATCCATCCAGTAATAATTCTACCGCCACCGGCTTCGATTTCATAGAGGAGCTCATCCGCGCTGCCGATTGCTTCGATACTAACCACCTCCACGTGGCTCACGTGATATTGGAGCGGCTCAATCAACGCCTCCGATCCCCTGCTGGTGCCAAGCCTCTCCAGCGCGCCGCCTTCTACTTCAAGGAAGCTCTCCAAGGCCTCCTTTCCGGTTCCAACCGCACTCCAAGACTCTCCTCCCTCGTTGAGATCGTTCACTGCATCAGAACTTTCAAGGCCTTCTCTGGAATCTCACCGATCCCTATGTTCTCCATCTTCACCACCAACCAGGCGCTCCTTGAGGCCTTTCATGGCTCCTCCTTCATGCACGTCGTTGATTTTGATATTGGATTAGGGATCCAGTATGCTTCACTCATGAAGGAGATCGCAGAGAAGGTTGACTCCTTGAAACACGGATCGCCTCTTCTGCGTATCACCGCCGTGGTTCCTGAAGAGTACGCCGTCGAGAGCGCGCTCATTCGGGAGAATCTCAGCCAGTTCGCGCACGAGCTCAGGATCCGCGTCCAGGTAGACTTTTTGCTGCTCCGCACGTTCGAGACGCTGTCGTTTAAGGCCGTGAAGTTCGTCGATGGCGAGAAAACCGCTGTTCTTCTCTCGCCGGCGATATTCCGACGGCTCGGATCCGCTGGGAACACCGCTGCGTTCCTGGCGGACGTTCGGAGGGTTTCGCCGAGCGTGGTAGTGTTCGTGGACGGGGAGGGGTGGACGGAAGCGGCGGCAGCGGCGTCGTTCCGGCGCGGAGTGGTGAGCAGCCTAGAGTTCTACTCGATGATGCTGGAGTCGCTGGACGCGTCGATGGTTGCGGGAGGGGAGTGGGTAAGGAGGATCGAGATGCTGCTGCTGCGCCCGAAGATACATGCGGCAGTGGAGGGAGCCGGGCGGAGGGTTCCTCCGTGGAGGGAAGCGTTCTACGGTGCCGGAATGAGGCCGGTGCAGTTAAGTCAGTTCGCAGATTTTCAGGCGGAGTGCTTGCTGGCTAAGGTGCAAATCAGGGGCTTCCACGTGGCAAAACGGCAAGCTGAGCTGGTGCTCTTCTGGCATGAGAGGGCCATGGTTGCTACTTCAGCTTGGCGCTGTTAG 1617 0.5622 MRVPVSSSPQANNNTTSNPKPVESLSTNIQSIPNNTSTLCYEPTSVLDLCRSPTPEKPAGLVANNNSQQECVEDQLEDHVLHNLDWDSIMKDLGFHEDSNPPLFKTMLHPTTTTTLPNVPDFPPSHDPSSFDPHSEFPDIHNTMPYNYANANATLDHLLHDPSSNNSTATGFDFIEELIRAADCFDTNHLHVAHVILERLNQRLRSPAGAKPLQRAAFYFKEALQGLLSGSNRTPRLSSLVEIVHCIRTFKAFSGISPIPMFSIFTTNQALLEAFHGSSFMHVVDFDIGLGIQYASLMKEIAEKVDSLKHGSPLLRITAVVPEEYAVESALIRENLSQFAHELRIRVQVDFLLLRTFETLSFKAVKFVDGEKTAVLLSPAIFRRLGSAGNTAAFLADVRRVSPSVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASMVAGGEWVRRIEMLLLRPKIHAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211859g00006 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 156 532 IPR005202 -
Stsc211859g00006 538 MobiDBLite consensus disorder prediction 1 34 - -
Stsc211859g00006 538 ProSiteProfiles GRAS family profile. 165 537 IPR005202 -
Stsc211859g00006 538 Pfam GRAS domain family 175 537 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211859g00006 Stsc-Chr211859 38291 39907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211859g00006 76 537 GRAS Transcription Factor Family AT4G36710 56.367 3.76e-170 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc211859g00006 GRAS 4.1e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211859g00006 - - aip:107640116 822.772