Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211851g00006 ATGGAAATTGTCACTGCAATTGCTGGAAAAGTTGTTGATCTCACAGTTGTTTCTATTGGACGTCAACTTGGATACTTATTCTTCTACAACAGCAATGTCAACAAACTCAAAACCAGTGTTGAGAAGCTGAAAGCAAAGATGGATGACACCAACATCTCTGTTGAAGAAGCCAAACAAATTGGTGAAACTAATGTTTTACCTTCAGTCCAAAAATGGATTGAGGAAGCTGAAGTAACTATTGCTGATGCAGCTGAAGTGATAGAAAAGGAAGCCCAAGGAGAAGGTAGATGCTTCAAGTGGACATTTCCAAACCTGTGTAAAAGGTACTATTTGAGCAGGGAGGCCAAAAAGTTGGAAGGAGATGTTTCCAATGCCATGTTAGAGAGAAAATTTGAGAAAGTTTGTTATCGTCCTTGTCCTGAAATGTCAGTCTCTCCATCTACTAGAGACTATGAAGCTATGTTATCAAGAACATCAACGTTGGATGCAGTTAAGGAGACATTAAATAATCCTGACATTTGTATGGTTGGGGTGTATGGCATGGGCGGAGTGGGTAAGACGACACTGGTGAAAGAGTTGGCTTGGCAAGCAGAGACAGAAGGTTTATTTTCAGTTGTGGTTATTGCTACTATAACCAGTGCCCCAAACTTGAGAGGCATCCAAGGCCAACTTGCTGATGGATTGGGTTTGAAACTCAATTCTGAGACTGAACAAGGCAGAGCAGCAGACTTACGTACAAGTATATCCGGAGAGAAGAGTATTCTTGTTATTCTTGATGACATTTGGGGCGAGCTTGATTTGACACAGGTGGGGGTTCCTTATGGTGATCAACACAAAGCATGCAAGTTGGTGCTCACTGGTAGAGATCTTAATGTGCTGCATAGGATGGGTACCCAAACAGATTTTCCACTTGGAGTCTTGTCTGAAGAAGAAAGCTGGACTTTGTTCGAGTCTATGGCAGGTGATGTTGTTAGGCATGGCAGGGTAGAAGCTATTGCAGTTAAGGTTGTCAAATGCTGCTTTGGTTTGCCCCTTTTGATTGTTGCTGTAGCGAAGGCTTTGAGGAAAACGGAAGATGTCTGTGTTTGGAAGGATGCCTTGACAAGATTGAAGGTATTCGATCATGAAGATTATCACAAAAACGTCTCCGAAAGGTTGAAGTTTAGTTATGATTGTTTAAAAGGTGAGGAGCTGAGATCACTATTCTTGCTCATTGGTTCCTTTGAACATGGTTTCAACAATTATGATGGTAGTTTGAAGGCTGAAGAACTGGTTCCAATTTGTTGGGCACTGGGGTTATATAAAAATGTGAGGTCATTGGAAGAGGCAAGAAACAGGCATTATACATTGGTAAAAGAGCTTATGGACTCTTCATTGTTGCTTGACAGTGAAATAAATAGGAGGTTCACTGATATAAATGAATGGCCAAACAAGGATCAACTTCAAAAGTTTCATCACATTATCTTGCCACAATATCTTATCTATGAGCTTCCTAGGAACGTAGAGTGCCCAAACTTGACACTATTTTTCCTTCGATTCTCAAGGGTTGACAACCTAAATGTCCAAGATAACCTCTTTTCAGGGATGCCGAGGTAA 1596 0.4104 MEIVTAIAGKVVDLTVVSIGRQLGYLFFYNSNVNKLKTSVEKLKAKMDDTNISVEEAKQIGETNVLPSVQKWIEEAEVTIADAAEVIEKEAQGEGRCFKWTFPNLCKRYYLSREAKKLEGDVSNAMLERKFEKVCYRPCPEMSVSPSTRDYEAMLSRTSTLDAVKETLNNPDICMVGVYGMGGVGKTTLVKELAWQAETEGLFSVVVIATITSAPNLRGIQGQLADGLGLKLNSETEQGRAADLRTSISGEKSILVILDDIWGELDLTQVGVPYGDQHKACKLVLTGRDLNVLHRMGTQTDFPLGVLSEEESWTLFESMAGDVVRHGRVEAIAVKVVKCCFGLPLLIVAVAKALRKTEDVCVWKDALTRLKVFDHEDYHKNVSERLKFSYDCLKGEELRSLFLLIGSFEHGFNNYDGSLKAEELVPICWALGLYKNVRSLEEARNRHYTLVKELMDSSLLLDSEINRRFTDINEWPNKDQLQKFHHIILPQYLIYELPRNVECPNLTLFFLRFSRVDNLNVQDNLFSGMPR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211851g00006 531 Gene3D - 306 394 IPR042197 -
Stsc211851g00006 531 Gene3D - 141 302 IPR027417 -
Stsc211851g00006 531 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 19 523 - -
Stsc211851g00006 531 Pfam NB-ARC domain 158 391 IPR002182 GO:0043531
Stsc211851g00006 531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 405 IPR027417 -
Stsc211851g00006 531 Coils Coil 33 60 - -
Stsc211851g00006 531 PRINTS Disease resistance protein signature 340 354 - -
Stsc211851g00006 531 PRINTS Disease resistance protein signature 175 190 - -
Stsc211851g00006 531 PRINTS Disease resistance protein signature 248 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211851g00006 Stsc-Chr211851 40263 41933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211851g00006 172 454 WRKY Transcription Factor Family AT5G45050 25.172 1.13e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211851g00006 - - adu:107458573 736.102