Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211850g00001 ATGCAGCACCAAGATCCCAACGCTGCCTCCTCCTCCCGCCAGCCAGACCCACACCCACCTCGCCGCAAGAGACAACGTACCAACCGTCGTCGACCTCGACCTCCCACACAACGATACCCGCCGCTGGGGCCCGACGACGACAGAGGTTACTTCGAATTCTACTCTCACCTTGGTGTTCACGAGGAGATGCTCAAGGATCATGTGCGTACGAGTACTTATAGGAAAGCAATCATGTATCATCAGGCTTCTATTGAAGGCAAGGTTGTACTTGATGTTGGATGCGGTACAGGCGTTCTTGCTATATTTTGTGCTCAGGCTGGTGCAAGGAAGGTGTATGCAGTTGAAGCCTGTGAATTTGCTGGGCTGGTGAACACTGTAGTTGAAGAAAATAAGCTTTCAGACATTATCGATGTATTGCATGGGCGAGTCGAGGAAGTTGAAATCCATGAGCAGGTGGATGTTATAGTTTCAGAATGGATGGGCTATATGCTTGTATTTGAGAGCATGCTTGCAAGCGTTATCGCTGCCAGAGATCGCTGGCTCAAACAAGATGGTCTAATTCTTCCTTCAAGTGCACTGTTGTACATGGCTCCTATCACTCATCCTGAACGATACAGTGAGACCATTGACTTCTGGCGTGATGTTCATGGAATTGATATGTCTGTCATTAGACCATATGCAAAACAGTGTGCATTTCAAGATCCTTGTGTGGAGACAATCACACCTGCAAATATTTTGGCATGGCCTCATCTGGTGACATGTATCAACTGTCATACTATTACCATTCCTGAGCTAGAGTCATTTCAAACATCTTTTAATATGAGATCAGTGAGGAAAGCTCCCCTACATGGTTTTGCATTTTGGTTTGATGTTGACTTTACTGGGAGTAACCAACCCACTTATAGTCCTATTAGGTCAACTCAAGCAACAAGTATTCTTGTGACTCCGCCTACCAGAACCCAACCTGCACCAAATTGGGAACAGGTGCAAAATATTGCCTCAACAGAAGCAGCTTTGGAAATGCTGGATCTTCCCTTACCCCCTTCAGGTGATGGCCACAATATTCCACCCCCAGTTCTGTCCACTGCTCCTAATGAACCTTCAACACATTGGGAACAGACTGTGCTTTACTTTTATGATCCAGTGGATGTGGAAAACAATCAAGTCATTGAAGGCACACTGACATTGTCACAAAACCCAACAAATAAAAGATTCTTGAATATTCGGCTTGATTTAATTTTAGGTGGTCTAATCTTGAAGAAAGAGACCACTTTGAGATGA 1281 0.452 MQHQDPNAASSSRQPDPHPPRRKRQRTNRRRPRPPTQRYPPLGPDDDRGYFEFYSHLGVHEEMLKDHVRTSTYRKAIMYHQASIEGKVVLDVGCGTGVLAIFCAQAGARKVYAVEACEFAGLVNTVVEENKLSDIIDVLHGRVEEVEIHEQVDVIVSEWMGYMLVFESMLASVIAARDRWLKQDGLILPSSALLYMAPITHPERYSETIDFWRDVHGIDMSVIRPYAKQCAFQDPCVETITPANILAWPHLVTCINCHTITIPELESFQTSFNMRSVRKAPLHGFAFWFDVDFTGSNQPTYSPIRSTQATSILVTPPTRTQPAPNWEQVQNIASTEAALEMLDLPLPPSGDGHNIPPPVLSTAPNEPSTHWEQTVLYFYDPVDVENNQVIEGTLTLSQNPTNKRFLNIRLDLILGGLILKKETTLR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211850g00001 426 MobiDBLite consensus disorder prediction 1 47 - -
Stsc211850g00001 426 MobiDBLite consensus disorder prediction 19 33 - -
Stsc211850g00001 426 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 47 426 IPR025799 GO:0016274|GO:0018216
Stsc211850g00001 426 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 53 413 IPR029063 -
Stsc211850g00001 426 Gene3D Vaccinia Virus protein VP39 44 189 IPR029063 -
Stsc211850g00001 426 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 39 412 IPR025799 GO:0016274|GO:0018216
Stsc211850g00001 426 Pfam Ribosomal protein L11 methyltransferase (PrmA) 83 164 - -
Stsc211850g00001 426 CDD AdoMet_MTases 89 188 - -
Stsc211850g00001 426 Gene3D - 191 417 - -
Stsc211850g00001 426 FunFam Protein arginine N-methyltransferase 6 44 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211850g00001 Stsc-Chr211850 398 3322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211850g00001 47 294 C2H2 Transcription Factor Family AT3G12270 38.783 6.31e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211850g00001 K11437 - mnt:21405865 443.736