Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211849g00003 ATGATCTTAGAGCCATGGAGTGTACCAGAAGTTTTGCGCCCACTTTATGAGTCATCAATGCTACTTGCTCAAAGAACAACCACTGCGGCTTTACGCCATTTAAGGCAGATTTCTCAAGAGGTTTCTCAGCCGAGTGTCACAGGATGGGGAAGAAGGCCTGCAGCTCTACGTGCACTTAGTCAGAGATTGAGCAAGGGATTCAATGAAGCTGTTAATGGTTTTGCTGATGATGGATGGTCCTTGTTGGAGAGTGATGGCATTGATGATGTCACCCTTCTTGTGAACTCTTCACCTAGCAAGATGATGGGAGCAAACCTTGGCTACAATGGTGGAGGATTCCCATCTGTCACCAGTTCTGTGCTATGTGCCAAAGCATCTATGTTGTTGCAGAATGTCCCTCCAGCAATTCTTCTTAGATTCTTGAGGGAGCACCGGTCGGAGTGGGCTGATAGCAGCATTGATGCCTATTCGGCTGCCGCCATCAAAGCCGGTCCATGTAACTTGCCGGCTGTCCGAGCAGGCGGTTTCGGGGGTCAGGTCATTCTTCCACTGGCTCACACAATTGAGCATGAAGAGTTCATGGAGGTCATTAAGCTTGAAAACATGGGTTACTATAGGGATGACATGACTATGCCTGGTGATGTTTTCCTCTTGCAGGATGGTGGTAGTCCTAACCGTACGCTTGATCTGGCGTCGGCGCTGGAAGTTGGAACGGCAGGGAGCAAAGCAGGCGGCGAAAACTCAGGCCATTCCGGGAGCACAAAGTCAGTGATGACAATAGCATTTCAGTTTGCATTTGAAGTCCATCTTCAGGACAACATTGCAGCCATGGCTAGGCAATATGTCCGGAGTATCATTGCATCTGTTCAAAGGGTTTCCCTAGCCCTTTCGCCGTCGCGATTCGGTTCTCAAAATGCTTTCCATTTGCCTCCTGGTACCCCTGAGGCACAAACACTTGCTAGGTGGATTTCTAGCAGCTATAGGTTCTATCTTGGGGTAGACCTGTTAAAGAGTGAGGGTAGTGAACCCATTCTCAAATCTCTTTGGCATCACACAGATGCTGTCTTGTGCTGCTCTCTCAAGGCATTACCTGTTTTCACCTTTGCAAATCAAGCTGGGCTTGACATGCTAGAAACAACATTGGTTGCACTTCAAGACATCACCCTTGAAAAAATCTTGGATGACAATGGAAAGAAAACTCTCTGCTCTGAGTTCCCCCAGATAATGCAGCAGGGTTTCATGTGCATACAAGGTGGGATATGTTTGTCAAGCATGGGAAGGCCAGTGTCATATGAGAGAGCAGTAGCATGGAAAGTGTTGAACGAAGAAGAAACGGCTCATTGCATCTGCTTCATGTTCATCAATTGGTCTTTTGTCTGA 1380 0.4768 MILEPWSVPEVLRPLYESSMLLAQRTTTAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSLLESDGIDDVTLLVNSSPSKMMGANLGYNGGGFPSVTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCNLPAVRAGGFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTMPGDVFLLQDGGSPNRTLDLASALEVGTAGSKAGGENSGHSGSTKSVMTIAFQFAFEVHLQDNIAAMARQYVRSIIASVQRVSLALSPSRFGSQNAFHLPPGTPEAQTLARWISSSYRFYLGVDLLKSEGSEPILKSLWHHTDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKILDDNGKKTLCSEFPQIMQQGFMCIQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211849g00003 459 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 223 459 IPR044830 GO:0003700
Stsc211849g00003 459 Pfam MEKHLA domain 318 458 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211849g00003 Stsc-Chr211849 34686 37125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211849g00003 3 459 Homeobox Transcription Factor Family AT4G32880 69.841 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211849g00003 K09338 - gmx:100815727 837.025