Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211841g00006 ATGGCATATGAAAAACCATTCCTTGACCTTAAGCTTAGCGTGGAAGATGTTATACTAGTAAAACCATCAAAACCAACTCCTTCATCTGTTCTCTCTCTTTCCACAATTGATAACAGACCTGAACTTCATAGTCTATGTCAAACCATTCACATTTTTGAACCCTCAAATAACATTATTCTTAATGATGACCCTGCACTTGTGATCAAAGAAGCACTCTCCAATGCTTTGTTCTATTACTACCCTCTTGCTGGAAGGCTTGTAAAACATGCTGATGGGAAACTTAGAATCCATTGCAATGCATTTGGAGTTCCATTTGTGGAAGCCATTGCAAATTGCAAGCTTTCTTGCCTTCACTACCTTGATGGTAGTGACACTGAAAATGCAAAACACTTAGCATTTGATAACCCTTTTCATGAAGATGACAATGAAAATTGTTATCAATATCCTTTGGGGATAAAGGTGACCAAGTTTCTCTGTGGCGGGTTCACTGTTGGAATAGGCGCATCCCATGCTGTTTTTGATGGATATGGAGGGTCTCAATTCTTTCAAGCCATAGCTGAACTCGCGAGTGGAAAAAGTGAGCCATCTGTGAAGCCTGTGTGGGAGAGGGAAAGGCTAAATGGATCAATTACTGAACATCCATTGCAAAGTTCCATGGATGAAGAACTCAATGAAAAACCACTCTCCCATGTGGTGAAGATGATCAAGGAGACTAAGAAACTCGGTTTTTCAAGGCAGTATATTATGAATGCTGTTGACACCAAGGAGACAGAAAGTGAACACTTTGATTATCAGGGTATTGGTGCATCTATGGTTCTGTCTAATTGGATGCATTTGGGTATGTTGGAAAACATGGACATAGGGTGGGCAAAGCCAGTGAACATGATACCGGCACCATGCAACATGTTTGGAACAGTTGGAGTGTGCATTTTCTCAGCTCCTAGTGACTTGGATCCTTCAATGAATGGAGGTGTTAGGATCTTTGTTTCTCTACCTAGTGATGCTATGCCCAAGTTCAAGGAAGAGATGGAACTCTTGTTGCTTGTTAAACCATAG 1056 0.4091 MAYEKPFLDLKLSVEDVILVKPSKPTPSSVLSLSTIDNRPELHSLCQTIHIFEPSNNIILNDDPALVIKEALSNALFYYYPLAGRLVKHADGKLRIHCNAFGVPFVEAIANCKLSCLHYLDGSDTENAKHLAFDNPFHEDDNENCYQYPLGIKVTKFLCGGFTVGIGASHAVFDGYGGSQFFQAIAELASGKSEPSVKPVWERERLNGSITEHPLQSSMDEELNEKPLSHVVKMIKETKKLGFSRQYIMNAVDTKETESEHFDYQGIGASMVLSNWMHLGMLENMDIGWAKPVNMIPAPCNMFGTVGVCIFSAPSDLDPSMNGGVRIFVSLPSDAMPKFKEEMELLLLVKP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211841g00006 351 Gene3D - 7 219 IPR023213 -
Stsc211841g00006 351 PANTHER ACYL TRANSFERASE 4 221 344 - -
Stsc211841g00006 351 Pfam Transferase family 218 345 - -
Stsc211841g00006 351 Pfam Transferase family 18 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211841g00006 Stsc-Chr211841 34626 35886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211841g00006 10 214 Monolignol Biosynthesis Gene Families AT5G48930 30.435 5.51e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211841g00006 K20240 - gmx:100801843 254.603