Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211836g00005 ATGGACCCTTACAAGGAGAGAATTAAGAGTGGATGCCACAAAATTCTGGATGGAATCAATTCAATGTCTTTGGTGAATTTAGATGACCAGCAAGTCCATTCCTTGGTGATGATGAGAGAAATTGCACGTGGGGTTGTTGATGATCAAAATAGGAAGGTGACTAGGAATGATGTGGTTAGTGCCTTGCGCCACGGCATTGAGAAAATGGTGTGTGCATCCAGGGATATCATTCAATTATTGAGTAGGATGTCTTTCGAAGGCTTGGATGATCAACAGATTAATTTAGTGTTGAGGATGAAAGAAATTGCACGTCGGATTATTGATAAACAGCCCAGAGTTGCAATTACTAGGCCTGATTTACTTGAAGAACAAGTTGCGTTTTTGGATGAGGAAATGAGAGATAGTCCTGGAGTTGAGTTGAGCAAGATCTGCAATGGGCATGCTCTGAATGATGTGGCGCAAAGCATGACTAATGATGATGATGTGTTAGATGTGGAACATGTTTTAAGATTTGAAAATGGGATGAATGACGTACAGGAGTCTCTATTGCCATCATGCTTCCAGCAATTTCTTCTGTGGCCTCCCGACGATTGTATCACTTTAGAGTGGGTTCAGGATATGATGTCCACATTTGAGCACACTTCACGGAAGATGTTGCCATCTTCATTTTGTCATGTTGTGCCAAGCATTTTGGTGGATAAATTGACAGATGCTGCTTCCAGTATTTTATGTGAAGAAGCAAATTGTGTGGAGGTTGACTGTGAAGGTGAAGATTCGAGGGTCATAGTAGTAGGCGATATACATGGGCAGTTTCATGATTTATTGTCTCTTTTCAAGCATGCAGGAGTGCCCTCCGAGAACCAGTTTTATGTTTTCAATGGGAATTATGTAGGTAAAGGTGCTTGGGGCATTGAAGTATTTTTGGTCTTGCTAGCTTGGAAGGTGTTGGTGCCTCACAGAATATATCTGCTCCGTGGAAATAATGAATCGAGATATTGCAAAGGAAGCTATGGTTTTGAGAATGAAGTATGGACCAAATATGGTGATCAAGGAGAAGATGTACACAACAAATTTTTAGAGTGCTTCAATGTGCTTCCGTTAGCTTCAGTTATAGCGAACTGTGTTTATACTACTCATGGAGGGCTTTTCCGTAGCACACATTCTGCTCCTTCACGAAAGGCAAAACGTCGGAAGACACAGAGGGTGGATCTTGGTTCTTTGGTTGAGTTATCTGAAGTTAAAAGAGCTTGTATTGATTCCCCTTATGAAGGTTCTAGTGTCTTATTGAGTGACATCCTCTGGTCAAAACCATCTAAAAGGAATGGTCTGAGGGAGAATGCAGGTCGAAAATATGGTTTATGGTGGGGTCCTGATTGCACTGAGGCTTTCTTAAAACAACACGATTTAAAGCTGATCATCAGATCACATGAAGGGCCTGATGCAAGGGCTGGTCAGGATGATTTTAGGAACATGATGATTGGATATAGCTTGGATCATGATGTAGAATCAGGAAAGTTATATACACTTTTTAGTGCTCCAGACTACCCTCAGTTTGGTCAAAAGAGATATAACAATGAAGGAGCATATGCAATATTGCAGTCTCCAGATTTTGCAAGTCCTACCTTTCTCTCATTCAAAGCTGCAGAAAGACCAATGGTGGATCCTTATGTTGATTTTGATACTGATGAGATGGACTTGCATGCCCTAAATTCTTCCCAAACAGCCTCAACCTCTGCCTTCTGTGCTTCTCAAAGACTGTATCCAGGTGGCTCGAGACCCTCTTTCGACTTCAGTATGTTGGGCATACACAATGGCCCGTCTTGGAGCGTTGAGCTTCTAGATGGTTTAGGTGGCACTCAGGTTATGCAGGTTCCAAGGGCCCCTGTGGTGGAAGGCTTGCCACTTCCTCCTAACATACCGGAGCCTCACCGGTCTGCATACAAGTACTTGTTTGAGCTGGTCGGTGCATTGAAACACGTGGTCGTAACAAGGGAGGCTGAGAACAGGGCCCGTGTGTCAGCATTGCGAAGCAGAGCCAAGAAACGAAAGGGTAAAAGCTAG 2061 0.4309 MDPYKERIKSGCHKILDGINSMSLVNLDDQQVHSLVMMREIARGVVDDQNRKVTRNDVVSALRHGIEKMVCASRDIIQLLSRMSFEGLDDQQINLVLRMKEIARRIIDKQPRVAITRPDLLEEQVAFLDEEMRDSPGVELSKICNGHALNDVAQSMTNDDDVLDVEHVLRFENGMNDVQESLLPSCFQQFLLWPPDDCITLEWVQDMMSTFEHTSRKMLPSSFCHVVPSILVDKLTDAASSILCEEANCVEVDCEGEDSRVIVVGDIHGQFHDLLSLFKHAGVPSENQFYVFNGNYVGKGAWGIEVFLVLLAWKVLVPHRIYLLRGNNESRYCKGSYGFENEVWTKYGDQGEDVHNKFLECFNVLPLASVIANCVYTTHGGLFRSTHSAPSRKAKRRKTQRVDLGSLVELSEVKRACIDSPYEGSSVLLSDILWSKPSKRNGLRENAGRKYGLWWGPDCTEAFLKQHDLKLIIRSHEGPDARAGQDDFRNMMIGYSLDHDVESGKLYTLFSAPDYPQFGQKRYNNEGAYAILQSPDFASPTFLSFKAAERPMVDPYVDFDTDEMDLHALNSSQTASTSAFCASQRLYPGGSRPSFDFSMLGIHNGPSWSVELLDGLGGTQVMQVPRAPVVEGLPLPPNIPEPHRSAYKYLFELVGALKHVVVTREAENRARVSALRSRAKKRKGKS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211836g00005 686 SMART pp2a_7 227 549 IPR006186 GO:0016787
Stsc211836g00005 686 Pfam Calcineurin-like phosphoesterase 260 479 IPR004843 GO:0016787
Stsc211836g00005 686 SUPERFAMILY Metallo-dependent phosphatases 221 555 IPR029052 -
Stsc211836g00005 686 Gene3D - 195 583 IPR029052 -
Stsc211836g00005 686 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Stsc211836g00005 686 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Stsc211836g00005 686 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Stsc211836g00005 686 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Stsc211836g00005 686 PRINTS Serine/threonine phosphatase family signature 411 438 IPR006186 GO:0016787
Stsc211836g00005 686 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Stsc211836g00005 686 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211836g00005 Stsc-Chr211836 25027 29443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211836g00005 191 471 Calmodulin-binding Proteins AT5G63870 50.859 1.85e-95 295