Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211836g00004 ATGGACCCTTACAAGGAGAGAATTAAGAGTGGATGCCACAAAATTCTGGATGGAATCAATTCAATGTCTTTGGTGAATTTAGATGACCAGCAAGTCCATTCCTTGGTGATGATGAGAGAAATTGCACGTGGGGTTGTTGATGATCAAAATAGGAAGGTGACTAGGAATGATGTGGTTAGTGCCTTGCGCCACGGCATTGAGAAAATGGTGTGTGCATCCAGGGATATCATTCAATTATTGAGTAGGATGTCTTTCGAAGGCTTGGATGATCAACAGATTAATTTAGTGTTGAGGATGAAAGAAATTGCACGTCGGATTATTGATAAACAGCCCAGAGTTGCAATTACTAGGCCTGATTTACTTGAAGAACAAGTTGCGTTTTTGGATGAGGAAATGAGAGATAGTCCTGGAGTTGAGTTGAGCAAGATCTGCAATGGGCATGCTCTGAATGATGTGGCGCAAAGCATGACTAATGATGATGATGTGTTAGATGTGGAACATGTTTTAAGATTTGAAAATGGGATGAATGACGTACAGGAGTCTCTATTGCCATCATGCTTCCAGCAATTTCTTCTGTGGCCTCCCGACGATTGTATCACTTTAGAGTGGGTTCAGGATATGATGTCCACATTTGAGCACACTTCACGGAAGATGTTGCCATCTTCATTTTGTCATGTTGTGCCAAGCATTTTGGTGGATAAATTGACAGATGCTGCTTCCAGTATTTTATGTGAAGAAGCAAATTGTGTGGAGGTTGACTGTGAAGGTGAAGATTCGAGGGTCATAGTAGTAGGCGATATACATGGGCAGTTTCATGATTTATTGTCTCTTTTCAAGCATGCAGGAGTGCCCTCCGAGAACCAGTTTTATGTTTTCAATGGGAATTATGTAGGTAAAGGTGCTTGGGGCATTGAAGTATTTTTGGTCTTGCTAGCTTGGAAGGTGTTGGTGCCTCACAGAATATATCTGCTCCGTGGAAATAATGAATCGAGATATTGCAAAGGAAGCTATGGTTTTGAGAATGAAGTATGGACCAAATATGGTGATCAAGGAGAAGATGTACACAACAAATTTTTAGAGTGCTTCAATGTGCTTCCGTTAGCTTCAGTTATAGCGAACTGTGTTTATACTACTCATGGAGGGCTTTTCCGTAGCACACATTCTGCTCCTTCACGAAAGGCAAAACGTCGGAAGACACAGAGGGTGGATCTTGGTTCTTTGGTTGAGTTATCTGAAGTTAAAAGAGCTTGTATTGATTCCCCTTATGAAGGTTCTAGTGTCTTATTGAGTGACATCCTCTGGTCAAAACCATCTAAAAGGAATGGTCTGAGGGAGAATGCAGGTCGAAAATATGGTTTATGGTGGGGTCCTGATTGCACTGAGGCTTTCTTAAAACAACACGATTTAAAGCTGATCATCAGATCACATGAAGGGCCTGATGCAAGGGCTGGTCAGGATGATTTTAGGAACATGATGATTGGATATAGCTTGGATCATGATGTAGAATCAGGAAAGTTATATACACTTTTTAGTGCTCCAGACTACCCTCAGTTTGGTCAAAAGAGATATAACAATGAAGGAGCATATGCAATATTGCAGTCTCCAGATTTTGCAAGTCCTACCTTTCTCTCATTCAAAGCTGCAGAAAGACCAATGGTGGATCCTTATGTTGATTTTGATACTGATGAGATGGACTTGCATGCCCTAAATTCTTCCCAAACAGTATGCGAACAAATAACCTTTTTAACAAGTTCTCCTCCGCTTTTCTTTTCATGTGATAACTACAGAATTAGTGAATTATATTTGTCTGTAATAAGAGCATTGGAAATTCTAAAAGAAGTAGATAATATTGTGCTGCCTATACAATTTCACATCATATAG 1881 0.4019 MDPYKERIKSGCHKILDGINSMSLVNLDDQQVHSLVMMREIARGVVDDQNRKVTRNDVVSALRHGIEKMVCASRDIIQLLSRMSFEGLDDQQINLVLRMKEIARRIIDKQPRVAITRPDLLEEQVAFLDEEMRDSPGVELSKICNGHALNDVAQSMTNDDDVLDVEHVLRFENGMNDVQESLLPSCFQQFLLWPPDDCITLEWVQDMMSTFEHTSRKMLPSSFCHVVPSILVDKLTDAASSILCEEANCVEVDCEGEDSRVIVVGDIHGQFHDLLSLFKHAGVPSENQFYVFNGNYVGKGAWGIEVFLVLLAWKVLVPHRIYLLRGNNESRYCKGSYGFENEVWTKYGDQGEDVHNKFLECFNVLPLASVIANCVYTTHGGLFRSTHSAPSRKAKRRKTQRVDLGSLVELSEVKRACIDSPYEGSSVLLSDILWSKPSKRNGLRENAGRKYGLWWGPDCTEAFLKQHDLKLIIRSHEGPDARAGQDDFRNMMIGYSLDHDVESGKLYTLFSAPDYPQFGQKRYNNEGAYAILQSPDFASPTFLSFKAAERPMVDPYVDFDTDEMDLHALNSSQTVCEQITFLTSSPPLFFSCDNYRISELYLSVIRALEILKEVDNIVLPIQFHII 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211836g00004 626 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 556 - -
Stsc211836g00004 626 SMART pp2a_7 227 549 IPR006186 GO:0016787
Stsc211836g00004 626 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Stsc211836g00004 626 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Stsc211836g00004 626 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Stsc211836g00004 626 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Stsc211836g00004 626 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Stsc211836g00004 626 PRINTS Serine/threonine phosphatase family signature 411 438 IPR006186 GO:0016787
Stsc211836g00004 626 SUPERFAMILY Metallo-dependent phosphatases 221 555 IPR029052 -
Stsc211836g00004 626 Pfam Calcineurin-like phosphoesterase 260 479 IPR004843 GO:0016787
Stsc211836g00004 626 Gene3D - 195 583 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211836g00004 Stsc-Chr211836 25027 29469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211836g00004 191 474 Calmodulin-binding Proteins AT5G63870 50.340 2.85e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211836g00004 K04460 - qsa:O6P43_002566 781.941