Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211834g00007 ATGTATTCAAACAGGAAATTGGGAAGGCCTCCCATAACTGCAAAGGGATTAGACTATGATTACTATTGGATATCATGCCCTAGGGTTGAAAGAATTGTGAGGAAGCATCTTGAAGATGTCTTTGTCAAGGACCCTGGTCAAGCTCCTGGCATTCTTCGTCTCTTCTTCCATGATTGCTTCTCTCAGGGATGCGATGCTTCAATATTGCTGGAAGGTGCAAGCGATGAAAAGACAGCAGATGAAAACATGGGGTTAAGGCAAGAAGCCATTCAGACCATTGAAAATCTTAGGGCTCTTGTCCGCAAGCAGTGCCTTAGGGTTGTCTCTTGCGCCGACATCCTAACCATCGCCGCTCGCGAAGCTGTTCGTCAGTTTGGAGGCCCTGATTTTGATGTGCCGTTGGGAAGAAAAGACAGCAAATCCTTCAACACATCCGCAGCCACAAATCTCCCAAAACCTTTCTTTAAAACCCCTGATCTTCTTAAATCTTTCACGGATAAAAAACTCGATGTCACGGATTTAGTTGCCCTATCCGGTGCACACACATACGGTGTAAGCCACTGCGGATCAGTCTTTGACTTTGAACAAATCATCCCCTTTAACCGGAGCACCGATGCGCCGATCGAGCCCCAGTTCAATAACAACCTCGTCAGGAAATGTCCCGACGAGGACAGTCCTGCAACCATTGACCTAGACATAAGAACACCAAACAAGTTCGACAACATGTACTACATTGATTTGTTGAACCAACAAGGGGTGTTTATCTCCGACCAAGATCTTGCTAATCATAAAGATACAAAGGAGATTGTGAACCAATTTGCTTCTAATCAGAAACTCTTCTTTGACAAGTTTGCTATTGCTTTTGTTAAGGCTTCACAGTTGGAAGTTCTTACTGGGAATGATAAGAGAGGTGAGATTCGTAAGACTTGTTTTGCTCCTAATGATAATGATGATGGGGTTTCTTCTTCTTCTCTGCTCAAAGAAGTTGTGGATTCGGCTAAGATAATAAATTAA 1014 0.4369 MYSNRKLGRPPITAKGLDYDYYWISCPRVERIVRKHLEDVFVKDPGQAPGILRLFFHDCFSQGCDASILLEGASDEKTADENMGLRQEAIQTIENLRALVRKQCLRVVSCADILTIAAREAVRQFGGPDFDVPLGRKDSKSFNTSAATNLPKPFFKTPDLLKSFTDKKLDVTDLVALSGAHTYGVSHCGSVFDFEQIIPFNRSTDAPIEPQFNNNLVRKCPDEDSPATIDLDIRTPNKFDNMYYIDLLNQQGVFISDQDLANHKDTKEIVNQFASNQKLFFDKFAIAFVKASQLEVLTGNDKRGEIRKTCFAPNDNDDGVSSSSLLKEVVDSAKIIN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211834g00007 337 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 Gene3D - 20 310 - -
Stsc211834g00007 337 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Plant peroxidase signature 286 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Plant peroxidase signature 26 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 PANTHER - 14 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 FunFam Peroxidase 20 157 - -
Stsc211834g00007 337 Gene3D Peroxidase, domain 2 152 292 - -
Stsc211834g00007 337 ProSiteProfiles Plant heme peroxidase family profile. 16 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 Coils Coil 336 337 - -
Stsc211834g00007 337 ProSitePatterns Peroxidases active site signature. 48 59 IPR019794 GO:0004601
Stsc211834g00007 337 SUPERFAMILY Heme-dependent peroxidases 16 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc211834g00007 337 FunFam Peroxidase 151 291 - -
Stsc211834g00007 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Stsc211834g00007 337 CDD secretory_peroxidase 16 312 IPR033905 GO:0004601|GO:0042744
Stsc211834g00007 337 Pfam Peroxidase 33 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211834g00007 Stsc-Chr211834 36210 38724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211834g00007 5 333 Peroxidase AT1G71695 47.605 2.05e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211834g00007 K00430 - gmx:100795412 398.667