Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211830g00002 ATGAAGGATGCAGATGTATCAAAGCAGATCCAGCAGATGATTAAGTTCATCCGCCAAGAAGCTGAGGAAAAAGCTAACGAAATATCTGTTACGGCCGAGGAGGAATTCAACATTGAAAAGCTACAACTGCTTGAGGCTGAGAAGAAAAAGATCAAGCAAGAGTATGAGAGGAAAGCAAAACAAATTGATGTTCGTAGAAAGATTGAATATTCGATGCAGTTGAATGCAGCTCGTATAAAAGTGCTTCAAGCACAAGACGAGGCTGTGAATTCAATGAAGGATGCTTCTAGAAAGGCTCTCTCACGTCTCACCAATGATAAGAAAGTTTATAGGAAACTCCTCAAGGACTTGCTTCTACAGAGTTTAGTGCGGTTGAGGGAACCATCGGTGATAATAAGATGCAGAGAGACTGATAAGAAGGTAATTGAGTCATTGCTTGAAGAATGTAAGAAAGAATACATGGATAAAGCTCGCCTCCAACAACCACCTAAGATTACCATTGACGATCGTGTTTATCTCCCACCACCACCCAAAAATGGCAACTCTGATTCTCTAGAACCATTTTGCAATGGAGGAATAGTGGTGGCTTCTGAGGACGGGAAGATAGTGCTGGAGAACACCCTTGATGCACGCTTGGATGTTATTTTCCGCCAGAAATTGCCAGAGGCATGCATGCATCTTCATCATTCTCCATTCACTAATATCTAA 708 0.4181 MKDADVSKQIQQMIKFIRQEAEEKANEISVTAEEEFNIEKLQLLEAEKKKIKQEYERKAKQIDVRRKIEYSMQLNAARIKVLQAQDEAVNSMKDASRKALSRLTNDKKVYRKLLKDLLLQSLVRLREPSVIIRCRETDKKVIESLLEECKKEYMDKARLQQPPKITIDDRVYLPPPPKNGNSDSLEPFCNGGIVVASEDGKIVLENTLDARLDVIFRQKLPEACMHLHHSPFTNI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211830g00002 235 Gene3D - 1 62 - -
Stsc211830g00002 235 Coils Coil 34 61 - -
Stsc211830g00002 235 SUPERFAMILY V-type ATPase subunit E-like 87 227 - -
Stsc211830g00002 235 Gene3D - 92 232 IPR038495 -
Stsc211830g00002 235 Coils Coil 7 27 - -
Stsc211830g00002 235 Pfam ATP synthase (E/31 kDa) subunit 16 224 IPR002842 GO:0033178|GO:0046961|GO:1902600
Stsc211830g00002 235 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
Stsc211830g00002 235 Coils Coil 100 120 - -
Stsc211830g00002 235 Hamap V-type proton ATPase subunit E [atpE]. 8 229 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211830g00002 Stsc-Chr211830 20490 22620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211830g00002 1 234 Primary Pumps ATPases(2) AT3G08560 63.248 2.61e-103 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211830g00002 K02150 - gmx:100791813 329.331