Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211827g00001 ATGGATTCTGTGAATTTGGATTGCCTCACACCAGTCGATCATCTTTCTGAAGATCATGAGCAGATTTCACAAGAATGTTATAATGTTGGAGTGGAACCACCATATGATGATCCTATGAATCCATCTTCTGAACCATGCCCTGTGAATTCTGTTATTGAAGAGGTGCCAGATCATAGTCACATATCAGAGGATGAAATCCCTAGAACTGGCATGTGTTTTGATTTTTTAGAGGAAGCTCATGATTTTTACAAGAATTATGCGGAGAAAGTGGGATTTGTTATCAAGATTAGGAATACAAATCATGTTAAAAATGCTAAGGGTGAGAAGATTCCAATTAATCAGTTAATCCATTGTAATCGAGAGGGTAATCGCATGTCACGAGCGAAGGCACCAAGAAGATTGAAGAAAATCACGGCTGCCATGTGCAATGCAAGGGTGTATGTCAAGTTTAACAAAGACAATACTAAATGGTTTTACTCAATAGTTGAAGGAAAGCACTCGCATCATTGTTCTCCTAAGAAGTCCATTCATTATCATGATTATAGGCATTTGAGTATGCATGCCAAATGTGTCATTGAAGACAATGACGAA 591 0.379 MDSVNLDCLTPVDHLSEDHEQISQECYNVGVEPPYDDPMNPSSEPCPVNSVIEEVPDHSHISEDEIPRTGMCFDFLEEAHDFYKNYAEKVGFVIKIRNTNHVKNAKGEKIPINQLIHCNREGNRMSRAKAPRRLKKITAAMCNARVYVKFNKDNTKWFYSIVEGKHSHHCSPKKSIHYHDYRHLSMHAKCVIEDNDE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211827g00001 197 ProSiteProfiles WRKY domain profile. 131 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211827g00001 197 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 196 - -
Stsc211827g00001 197 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211827g00001 Stsc-Chr211827 11 894 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc211827g00001 FAR1 2.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211827g00001 - - adu:107476090 180.259