Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211823g00004 ATGGCCATGGGGGATTCAAAGGTAGAAACAATTGCGCGCTTAGCTCAATGGAAAATCGATAACTTCGGTCCCTGTTCCTACAAGAAATCTGATCCTTTCAAGATCGGAATCTGGAACTGGTACATAGCCATAGAGAGGAACAGGTACCTCTACATACACCTGTTTCCAGAAGCTTCTCGTGTCTCCAAAGAGCAGCCACCCGTTGCTCGTTTCATTCTTCGAGTCTCCAATGCTGGCTCTTCCCGCAGATTCTATATTTCCCCTGTCCATGAAAGGATACTTAGGACCTATGATGACTTTGTCTGGCCTGTTGATACTACATTCGTTGGTCGCTTCATTATTGATGTTGAATTTCTTGACTTGAAGATATGCCCTCTGAATGGTGGGGAAGCTAGTTCTATATGGCCATCTGAGGGAAAATTGCAATCCATTGCATCTCAAAGTACACTCAGTTGCCTCTCACGCATGCTTGATGAGACTATACATGCTGACCTAACCATTATGACCGCCGATGAAGACATGTCGTTAGAATCTTGCACGGCTCTTCTACGTTACTTGTACGGAACAATCAAGCAAGACGATTTCTGGAAACACCGGCTCGCATTGCTCGGTGCAGCCAATAAATATGACATCACGGGTCTCAAAGAAGTGTGCGAAGACAGTCTGCTGGAAGATCTTAACTCTGGAAACGTTCTCGAGAGGCTCAACGAGGCTTGGCTTTATCAATTACACAAGTTAAAGAAAGGATGCTTGACCTTCTTATTTGAATTCGGCAAGATATATGATGTTAGAGATGAAGTAAACAACTTTTTCCAGCATGCTGATAGGGAGCTAATGATGGAGATGTTTCAGGAAGTGCTCTCAGTTTGGAAGCCGTAA 879 0.4425 MAMGDSKVETIARLAQWKIDNFGPCSYKKSDPFKIGIWNWYIAIERNRYLYIHLFPEASRVSKEQPPVARFILRVSNAGSSRRFYISPVHERILRTYDDFVWPVDTTFVGRFIIDVEFLDLKICPLNGGEASSIWPSEGKLQSIASQSTLSCLSRMLDETIHADLTIMTADEDMSLESCTALLRYLYGTIKQDDFWKHRLALLGAANKYDITGLKEVCEDSLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFEFGKIYDVRDEVNNFFQHADRELMMEMFQEVLSVWKP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211823g00004 292 CDD MATH 17 103 IPR002083 GO:0005515
Stsc211823g00004 292 SUPERFAMILY POZ domain 146 225 IPR011333 -
Stsc211823g00004 292 PANTHER OS08G0495500 PROTEIN-RELATED 3 172 IPR044714 -
Stsc211823g00004 292 Pfam BTB/POZ domain 155 224 IPR000210 GO:0005515
Stsc211823g00004 292 Gene3D Potassium Channel Kv1.1; Chain A 172 255 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211823g00004 Stsc-Chr211823 23103 25499 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Stsc211823g00004 BTB 8e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211823g00004 K10523 - cave:132189340 493.426