Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211819g00010 ATGAGTGTTCTCCTTGCTACTATCCTCTTACTAATCCCAGTTCTTCTTCTTTTGATTAGAAGAAGAAGAACATCCAAAAGGGTCCCACCTGGTTCACTTGGAATACCAATCATTGGTCAAAGCCTTGGCCTTCTTAGAGCTATGCGTGCAAACAATGCAGAGAAGTGGATTGAACAAAGGATCAGAAAGTATGGTCCTGTTTCAAAGCTAAACTTGTTTGGAAAACCAACTGTTTTGATCCATGGACAGGCTGCAAACAAGTTCATATTCTCTAGCAGTGGAGGCACGCTTTCTAACCAGCAAACACAGTCTGTTAAGATGATCTTGGGAGACCGGAATGTGCTCGAACTCAGTGGCGAAGATCATAAGCGAGTCAGAAGCGCTCTCATGTCATTCCTCAAGCCGGAATCATTGAAGCTGTATGTGGGGAAGATTGATGAGGAAGTTAGGAGGCACCTTGAGATGCATTGGAATGGAAAACAGCAAGTTAAGGTGTTACCTCTGATGAAGACACTAACATTCAACATAATTTGCTCTCTTTTGTTTGGTCTTGAGCGTGGAAAGCAAAGAGATCAGTTCCTAGGTTCATTCCAGAGAATGATTGAAGGAATGTGGTCGATTCCTATTAACTTGCCGTTCACACGATACAATCGAAGCCTCAGAGCAAGTGCAAGGATCCAGAAGATGTTGAAGCAGATTGTGAACAAAAAAAAGGTTGAACTTGAAGGAAATGAAGCCTCTACTCACCAAGATTTGATCACTTGCTTGCTTGACATACAAGGTGCTAATGATGAACAAGTTNNNNNNNNNNTCATGGTTGCTGGATATGACACTTCATCTGTTCTAATCACTTTCATTATCAGACTCTTAGCTAATGAACCTGCAATTCTTGCAGCAGTTCTTCAAGAACAAGAAGAGATAGCAAAAAGCAAGAAATCAGGAGAGCCTCTAACATGGGAAGACCTTGCAAAAATGAAGTACACATGGAGAGTAGCATTGGAAACTCTTAGGGTGTTTCCTCCTATCTTTGGTGGCTTCAGAAAGACAGTGACAGATATTGAATATGATGGATACATTATTCCCAAAGGGTGGCAGATCTTCTGGGTTACAGCAATGACTCAAATTTACAATAGCATATTCCCAGAGCCATCAAAGTTTGATCCAAGTAGATTTGAAGACCAATCATCTATTCCACCATACTGCTTCATTCCATTTGGAGCTGGATCAAGAATATGTCCAGGGTATGAGTTGGCCAAGATTGAAACTCTTGTTTCAATCCATTATCTGGTGACTAGATTCAGTTGGAAACTATGTGCAGACAATAACTTCAAGAGGGATCCAATGCCAGTTCCAACTCAAGGTCTTCCAATTGAGATTTGGCCAAGGAAAAATCTTTCTTAA 1401 0.4083 MSVLLATILLLIPVLLLLIRRRRTSKRVPPGSLGIPIIGQSLGLLRAMRANNAEKWIEQRIRKYGPVSKLNLFGKPTVLIHGQAANKFIFSSSGGTLSNQQTQSVKMILGDRNVLELSGEDHKRVRSALMSFLKPESLKLYVGKIDEEVRRHLEMHWNGKQQVKVLPLMKTLTFNIICSLLFGLERGKQRDQFLGSFQRMIEGMWSIPINLPFTRYNRSLRASARIQKMLKQIVNKKKVELEGNEASTHQDLITCLLDIQGANDEQVXXXXMVAGYDTSSVLITFIIRLLANEPAILAAVLQEQEEIAKSKKSGEPLTWEDLAKMKYTWRVALETLRVFPPIFGGFRKTVTDIEYDGYIIPKGWQIFWVTAMTQIYNSIFPEPSKFDPSRFEDQSSIPPYCFIPFGAGSRICPGYELAKIETLVSIHYLVTRFSWKLCADNNFKRDPMPVPTQGLPIEIWPRKNLS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211819g00010 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Stsc211819g00010 466 Gene3D Cytochrome P450 19 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PANTHER CYTOCHROME P450 26 26 450 - -
Stsc211819g00010 466 CDD CYP90-like 60 461 - -
Stsc211819g00010 466 Pfam Cytochrome P450 29 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 SUPERFAMILY Cytochrome P450 20 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211819g00010 466 FunFam Taxadiene 5-alpha hydroxylase 19 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211819g00010 Stsc-Chr211819 33004 34794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211819g00010 1 442 Cytochrome P450 AT5G45340 31.991 3.73e-76 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211819g00010 - - gmx:100790001 729.169