Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211819g00008 ATGATGAGCATCAATACTGAAATCTTGAAGAAATTTAATCTTGCAGATAGCAGCAAGCGGAATTTCATCGAAAGCGAAATAGAAAGACTTGGAAAAGGAAATGTAACCTCTCATATTTTTACATATTCCGAGCTATGCTTCGCAACCCGGAACTTTCACCCTGACTACATGATTGGTGAAGGAGGCTTTGGAAGAGTATACAAAGGATTCCTTAGAGGAACAAATCAGGCTGTAGCTGTGAAGCAACTTAACAGGAATGGATTTCAAGGAAACAGAGAATTTCTTGTGGAGGTTTTGCTCTTGAGCCTGTTGCATAACCCTTACCTTGTGAATTTGGTAGGGTATTGTGCTGATGGTGATCAAAGGGTCCTTGTGTATGAGTATATGGTTAATGGTTCTTTAGAAGATCATCTTTTTGATCTACCTCCAGGGAAAAAGGCATTGGACTGGAGCACAAGAATGAAGATTGCAGAAGGTGCTGCTAGAGGACTTGAATATTTACACGAAGCATCGAACCCGCCGGTGATATATCGCGATTTCAAGGCATCAAACATACTTTTGGACGAGGATTTCAATCCAAAGTTATCCGATTTTGGACTCGCGAAGCTCGGTCCGACCGGCGATAAGACTCATGTGTCAACAAGGGTGATGGGGACTTATGGTTATTGTGCTCCTGAGTATGCCTCCACAGGGCAATTGACGACGAAATCTGATGTGTATAGCTTTGGCGTCGTGCTTTTGGAGATGATCACAGGGAGAAGAGTCATTGATCATTTGAGACCATCTGGGGAGCAAAACTTAATTTGTTGGGCACAGCCACTACTCAAAGACAGAAGGAAGTTTACACAAATGGCTGATCCATTGCTAGAAGGGAGATACCCAATAAGGGGTCTATACCAAGCAATAGCAATAGCAGCAATGTGTCTTCAGGAGGATGCTGAATTAAGGCCTTTGATTAGTGATGTAGTTACAGCTCTTAATGTATTAGCAAAGAAGAATGTAGAAGTGTGTGAAAGGCCACAACAAGAGGCATTAGAGAGTAAACTCAGGACTGAAAATAATAACAATAATAATTCAGTTGAGGTTTGA 1089 0.4169 MMSINTEILKKFNLADSSKRNFIESEIERLGKGNVTSHIFTYSELCFATRNFHPDYMIGEGGFGRVYKGFLRGTNQAVAVKQLNRNGFQGNREFLVEVLLLSLLHNPYLVNLVGYCADGDQRVLVYEYMVNGSLEDHLFDLPPGKKALDWSTRMKIAEGAARGLEYLHEASNPPVIYRDFKASNILLDEDFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVLLEMITGRRVIDHLRPSGEQNLICWAQPLLKDRRKFTQMADPLLEGRYPIRGLYQAIAIAAMCLQEDAELRPLISDVVTALNVLAKKNVEVCERPQQEALESKLRTENNNNNNSVEV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211819g00008 362 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211819g00008 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Stsc211819g00008 362 Gene3D Phosphorylase Kinase; domain 1 37 128 - -
Stsc211819g00008 362 CDD STKc_IRAK 58 327 - -
Stsc211819g00008 362 FunFam Serine/threonine-protein kinase PBS1 129 345 - -
Stsc211819g00008 362 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Stsc211819g00008 362 PANTHER OS07G0668900 PROTEIN 25 337 - -
Stsc211819g00008 362 Pfam Protein kinase domain 56 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211819g00008 362 SUPERFAMILY Protein kinase-like (PK-like) 38 334 IPR011009 -
Stsc211819g00008 362 Gene3D Transferase(Phosphotransferase) domain 1 129 356 - -
Stsc211819g00008 362 FunFam Serine/threonine-protein kinase CDL1-like 23 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211819g00008 Stsc-Chr211819 24912 26403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211819g00008 34 330 Glycoside Hydrolase AT3G07070 69.697 4.23e-156 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc211819g00008 Pkinase 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211819g00008 - - gmx:100798032 526.168