Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211817g00005 ATGGTTTTGTCGGTCCTATCCAGGAGTAGAGGTTTGAGTCCCAAAGGAACTGCAGTCAACTTAAAAAAGAATAATGGCATGTTTCTTCCATCCATTTCTTTGGGAAGAACATATATCCCACTGTTGTCTGTTGTTCGAAGAAAAAATGATACGCAACCACTGAGTGTTTCTTCAGGAAAAGCATATGCTGCATTGACAGCTGATTCTTCCTCGCTATTTGCTGGTGATCGAGATCATCTCTCACTCAAACCTCCTACGTCTCGTGGATCCAATTCTAATATCCGTGGACAAGCATACATTTATCATTCTTCTGGCTTTCGAATTCCTGCAAATGCAGAGAAGCCAGAATGGTGGTGGAGGACACTCTGTTGTGTTCCTTATCTAATTGCATTGCAGTTGTCTGCAACTGGGTTTTATCTCGAACCTTTACTTGAAAAATTCCCACTTTTCCGAAATCTGATCTACTATATTCCAGGAGCTGTGAACAGATTACCAACCTGGTTCCCTATACTCTATTGCTATTTGGCCATTGTTGGAGTGGTAAAGAACAGTAGATTCCCCCTTCTCTTCAGATACCATGTAATGATGGGAATGCTACTAGAAATCGCGCAGCAGATATTCTGGGTTACATGCAATTTCTTGCCGCTTATACACTTCAAAGGGACACTTGGTATGTATTATTGGGGTGGTGTAGCTTTGGGATATATTCTCATATTGGGAGAGTGTGTAAGGTGTGCAATTCTGGGTACCTTTGTGAAGATTCCTGTTATTAGTGAATCAGCATTCATTCATTGTCTATATGGTTTAGGATTAAGGTAG 819 0.4103 MVLSVLSRSRGLSPKGTAVNLKKNNGMFLPSISLGRTYIPLLSVVRRKNDTQPLSVSSGKAYAALTADSSSLFAGDRDHLSLKPPTSRGSNSNIRGQAYIYHSSGFRIPANAEKPEWWWRTLCCVPYLIALQLSATGFYLEPLLEKFPLFRNLIYYIPGAVNRLPTWFPILYCYLAIVGVVKNSRFPLLFRYHVMMGMLLEIAQQIFWVTCNFLPLIHFKGTLGMYYWGGVALGYILILGECVRCAILGTFVKIPVISESAFIHCLYGLGLR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211817g00005 272 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 51 266 IPR005691 -
Stsc211817g00005 272 Pfam Chloroplast import apparatus Tic20-like 95 261 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211817g00005 Stsc-Chr211817 28467 29875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211817g00005 3 270 Chloroplast and Mitochondria Gene Families AT4G03320 43.571 1.19e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211817g00005 - - ahf:112782565 488.804