Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211810g00001 ATGTCTCTTAAATGTGCTGTTGAGTTGGGCATACCTGATGTCATTTATAATTATGGCCAACCTATGCCACTCTCAAAGCTCATTGCTTCATTGAAAATTCATCCATCAAAAACCTCTTTCATCTATCGCTTGATGAGAATCTTAATCCATTCCGGCTTCTTTGCTACCAACAAGAATGTTGACGACAAAGATCTCGAAGAAAGCTTTATTCTAACGGACTCGTCTGTATTGTTGCTTATGAACAACCCCTTAAGCATCAGACCTTTCTTATTGCTTGTCATGCTTGATCCAATTTTGACAAATCCATGGCATAAATTGTCCACATGGTTCCAAGATGATAATCCAACAGCATTTGAAACGGAATATGGGATAATGTTTTGGAGATATGCGAGCAATGTGCCTAAATTGAATGAACTTTTCAATAATGCCATGGCAAGTGATGCTCGATTTGTTAGCAAGTTGTTAGTTGATGAAAAGTGTAAGGGTGTGTTTGAGGGTTTGGAATCGTTGGTTGATGTTGGTGGCGGCACTGGAACTCTTGCAAAGACCATTGCCAAATCATTTTCACAGTTAGAGTGCACTGTTTTTGATCTTCCTCATGTTATTGCTGGCTTAGAAGAAAGTGAAAACCTTAAATATGTTGGAGGGGACATGTTTGATGTGATTCCTCCATGTAATGCCGTTTTATTGAAGTGGATTTTGCATAACTGGAATGACGAGGAATGTTTGAAAATATTAGGGAAATGCAAAAAGGCAATCATGAAGAATGGTAGCAAAAGAGGGAAGGTGATTATCATAGATATGGTGATGAAGGATGATGAGAAGAATGGTGATGATGAATCACTTGAAACACAACTTTTCTTTGACATGCAAATGTTGATGTATCACGCTGGAAAAGAGAGAACTGAAAAAGAATGGATCAAGCTAATATTTTCTGCTGGTTTTAGTGACTACAAGATAACTCCAATTCTAGGAATAAGGTCTCTCATTGAGATATATCCTTAG 1005 0.3771 MSLKCAVELGIPDVIYNYGQPMPLSKLIASLKIHPSKTSFIYRLMRILIHSGFFATNKNVDDKDLEESFILTDSSVLLLMNNPLSIRPFLLLVMLDPILTNPWHKLSTWFQDDNPTAFETEYGIMFWRYASNVPKLNELFNNAMASDARFVSKLLVDEKCKGVFEGLESLVDVGGGTGTLAKTIAKSFSQLECTVFDLPHVIAGLEESENLKYVGGDMFDVIPPCNAVLLKWILHNWNDEECLKILGKCKKAIMKNGSKRGKVIIIDMVMKDDEKNGDDESLETQLFFDMQMLMYHAGKERTEKEWIKLIFSAGFSDYKITPILGIRSLIEIYP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211810g00001 334 PANTHER O-METHYLTRANSFERASE 1 319 IPR016461 GO:0008168
Stsc211810g00001 334 Gene3D - 1 78 IPR036388 -
Stsc211810g00001 334 Pfam O-methyltransferase domain 103 316 IPR001077 GO:0008171
Stsc211810g00001 334 SUPERFAMILY "Winged helix" DNA-binding domain 1 82 IPR036390 -
Stsc211810g00001 334 PIRSF O-mtase 1 334 IPR016461 GO:0008168
Stsc211810g00001 334 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 334 IPR016461 GO:0008168
Stsc211810g00001 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 332 IPR029063 -
Stsc211810g00001 334 Gene3D Vaccinia Virus protein VP39 81 334 IPR029063 -
Stsc211810g00001 334 FunFam O-methyltransferase ZRP4 80 334 - -
Stsc211810g00001 334 Pfam Dimerisation domain 1 48 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211810g00001 Stsc-Chr211810 6104 7347 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211810g00001 1 320 Monolignol Biosynthesis Gene Families AT5G54160 32.615 4.07e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211810g00001 - K16040 aip:107609507 497.664