Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211804g00001 ATGGCAAACAAGGTGAATCAACATGATCACAAAGTGCATTTGATAGAGAAATGTCAAGTTGGTCCTTTACCGGGTTCAGTTCCTTCTCCAAACTTTGTTCCTCTTTCTTTCTTTGACCTCGCAATGCTAATTTGTCCAACATCATGTAAACGCATTTTCTATTATGACTTCCCTTACCATAAGTCAGAGTTCCTTGAAAAAGTGCTTCCAAATCTTAAGCAATCACTTTCTCTTGCTCTCAAACACTTTTTCCCTTTGTGTTCCAACATAATTTTCCCCCCAAAGCCACAAACCCCGCACATCCTCTACTCTGAAGGTGACACTCTTACATTTATTGTGGCCGAGTCCACCGCAAATTTCAACAATCTCGCATCTCACACACCAAAAAGTATCACATCTTTGGATGATTTTGTTCCTATTTTGCCTTCACCAAGTACTTTAGAAGATGGTATCTTGTTGATCACTCCTATGTCCATTCAAGTCACTATACTTCCGAATTATGGTTTCACTATATGCTTCAATTTTAGCCATGTAATTACAGACGGAAGAGGCTTTCAAAATTTCCTCAAGCTTTGGTCTTCACTTTGTATGCTAAAAGAGGACATGTTTTCTTCTAAAGCGGGCTTACTTTATTTCTCGTCACTTACCAAGGATAACATCAGTGACCCAAATAAGTTAAAGTCTATTTTTTTAGAAAAATTGTGGAGCATGCCCTTAAATAGAATAGGTCAGATGGAGATGGACAATTTTATTCCTAAAAATGTTGCTAATCAAATGGTGCGACAAACTATTGTGTTGACACATGACCATATTGCAAATTTGAAGAAATTAGTGTCTATGAAGTGCCAAAACCTTGGTCTAGGGACATCATTGCACGTGTCAACATTTATGGTGACATGCTCTTTGGTTTGGGTTTCTAATATTAAGTCAAAAGTGGCTGAACTTGGTGTTGACGAATTTCCCATTGAAGATGAGGATTTTTACTTTGGTGTTTTGTCTGATTGTCGCTACCTTAGTGAATTGAAAATACCGTTAACATACTTTGGGAATTGTTTGGCTACTGCCGTAGCAGTAGTCAAGAGGAGCAAGCTAGAAGGGGAAAATGGTATTTTTGAGGCAGCTATTGCTATTGGAAGAAAAATTAAAGAATTGCAATCTGAACCCTATAAAGGTGTTGAAACACTCATGTCAATGTTTACAAGTTATGATGCAACAATAAGTCAACGTATACTGGGCATTACAGGTTCGCCAAAGTTGGGTTCATATGAGATTGATTTTGGGTGGGGCAAACCCAAACTGACTGAAATACTTCATGTAAATCATCCAGGAGTATTCTCCCTTTGTCCTTGTAGGGACATAGAAGGTGGAGTTGAAGTTGGAATTGCCCTTGAAAGTAGTCATATGGACAAATTCAACATTATTTTGAACGAGCTCCTTACAAATCTTTGA 1449 0.3796 MANKVNQHDHKVHLIEKCQVGPLPGSVPSPNFVPLSFFDLAMLICPTSCKRIFYYDFPYHKSEFLEKVLPNLKQSLSLALKHFFPLCSNIIFPPKPQTPHILYSEGDTLTFIVAESTANFNNLASHTPKSITSLDDFVPILPSPSTLEDGILLITPMSIQVTILPNYGFTICFNFSHVITDGRGFQNFLKLWSSLCMLKEDMFSSKAGLLYFSSLTKDNISDPNKLKSIFLEKLWSMPLNRIGQMEMDNFIPKNVANQMVRQTIVLTHDHIANLKKLVSMKCQNLGLGTSLHVSTFMVTCSLVWVSNIKSKVAELGVDEFPIEDEDFYFGVLSDCRYLSELKIPLTYFGNCLATAVAVVKRSKLEGENGIFEAAIAIGRKIKELQSEPYKGVETLMSMFTSYDATISQRILGITGSPKLGSYEIDFGWGKPKLTEILHVNHPGVFSLCPCRDIEGGVEVGIALESSHMDKFNIILNELLTNL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211804g00001 482 Gene3D - 12 243 IPR023213 -
Stsc211804g00001 482 Pfam Transferase family 32 472 - -
Stsc211804g00001 482 Gene3D - 256 481 IPR023213 -
Stsc211804g00001 482 PANTHER - 12 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211804g00001 Stsc-Chr211804 3609 5057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211804g00001 43 478 Monolignol Biosynthesis Gene Families AT5G48930 21.719 3.81e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211804g00001 - - ahf:112729058 681.789