Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211802g00002 | ATGCTGACAGGGCAGATACCCAGGGGGATATTCCAGCTCAGCAATCTCAACAAACTTCTGTTACTCTCTAACAACCTTTCCGGAATCATTCCTCCTGAGATTGGTAACTGCTCCTCACTGATACGCTTCAGAGCGAGTAATAACAAGATTAGTGGTAGCATTCCGCCTCAGATTGGCAACTTGAAGAATCTCAACTTCTTGGACCTTGCCAATAACCGTATCTCGGGTGTTATCCCGGAGGAAATCTCTGGCAGTCGGAATCTTACTTTCTTGGACTTACATTCTAATTTGATCGCCGGAAACTTGCCGGAGAGTCTCAGCGAGCTTGTTTCGCTTCAGTTTCTAGATGTTTCTGATAACGTCATCGGAGGGACGTTGAGTCCTTCTCTTGGTTCGCTTGGTGCGTTGACGAAGCTGGTGTTAGGGAGGAATCGGATCTCCGGTTCAATTCCGAGTCAACTCGGTTCTTGCTCAAAGCTTCAGTTGCTGGACCTTGGCAGCAACCAGCTCGACAGAGAGATCCCTGGAAGTCTTGGAAACATTCCGGCTTTGGAAATAGCCATGAATCTAAGCCTCAACCAACTCTCCGGCGACATTCCAAGGGAGTTCTCGAACTTGGCGAAGCTCGGAGTCTTGGACATTTCTCACAACGCTATCACCGGAAACCTCCAATATCTCGCGGGTTTGCAAAATCTCGTGGTGCTTAACGTCTCGCACAACAGATTCTCAGGGCGCGTCCCGGACACTCCGTTCTTCACGAAGCTTCCAATTAGCGTGCTAGAAGGGAACCCCGCGCTGTGCTTCGCCGGAAACCAGTGCTCCGGTGACGGCAGCGGTGCCGGAAAGTCATCACGTCGGGCAAGGGAGGCGCGCGTAGCGATGGTGGTCCTGTTGAGCATAGCATGCGCTCTGCTCATGGCGGCGCTATACGTCGTCGTCTCTGCCAAACGACGGGGGGACCGTGAAAACGACGTGGAAATGGATGGAAAGGATAGCGACGGCACAGACATGGCCCCACCATGGGAAGTAACACTTTACCAGAAACTCGATTTGTCGATTTCTGACGTGGCAAAATGCCTCTCCTCCAGCAACGTGATCGGCCACGGCCGATCCGGCGTCGTTTACAAGGTGAACATGCCTGGAACGGGGCTGACCATCGCCGTGAAGAAGTTTAAGGCGTCGGAGAAACTATCGGCGTCGGCGTTCTCGTCGGAGATTGCCACACTGGCAAGGATCCGCCACCGTAACATAGTGCGGTTACTTGGTTGGGGCGCGAACCGTAGAACAAAGTTACTGTTTTACGATTATTTACCTAACGGTAACTTAGACACGCTGTTGCACGAGGGGTGCACAGGGTTAATAGAGTGGGAGACGCGGCTCAAGATAGCATTGGGCGTGGCTGAAGGCCTAGCTTACTTGCACCACGATTGCGTCCCTGCTATCTTGCACCGTGACGTTAAAGCCCTCAACATTCTGTTAGGCGACAGGTATGAACCCTGTTTGGCTGATTTTNNNNNNNNNNGAAGAAGATCATCCTTCTTTTTCCGTTAA | 1551 | 0.5158 | MLTGQIPRGIFQLSNLNKLLLLSNNLSGIIPPEIGNCSSLIRFRASNNKISGSIPPQIGNLKNLNFLDLANNRISGVIPEEISGSRNLTFLDLHSNLIAGNLPESLSELVSLQFLDVSDNVIGGTLSPSLGSLGALTKLVLGRNRISGSIPSQLGSCSKLQLLDLGSNQLDREIPGSLGNIPALEIAMNLSLNQLSGDIPREFSNLAKLGVLDISHNAITGNLQYLAGLQNLVVLNVSHNRFSGRVPDTPFFTKLPISVLEGNPALCFAGNQCSGDGSGAGKSSRRAREARVAMVVLLSIACALLMAALYVVVSAKRRGDRENDVEMDGKDSDGTDMAPPWEVTLYQKLDLSISDVAKCLSSSNVIGHGRSGVVYKVNMPGTGLTIAVKKFKASEKLSASAFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLDTLLHEGCTGLIEWETRLKIALGVAEGLAYLHHDCVPAILHRDVKALNILLGDRYEPCLADFXXXXRRSSFFFR | 516 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211802g00002 | 516 | FunFam | LRR receptor-like serine/threonine-protein kinase | 349 | 436 | - | - | |
Stsc211802g00002 | 516 | Gene3D | Ribonuclease Inhibitor | 1 | 274 | IPR032675 | - | |
Stsc211802g00002 | 516 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 481 | 493 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc211802g00002 | 516 | SMART | LRR_typ_2 | 61 | 85 | IPR003591 | - | |
Stsc211802g00002 | 516 | SMART | LRR_typ_2 | 229 | 262 | IPR003591 | - | |
Stsc211802g00002 | 516 | SMART | LRR_typ_2 | 13 | 37 | IPR003591 | - | |
Stsc211802g00002 | 516 | SMART | LRR_typ_2 | 158 | 180 | IPR003591 | - | |
Stsc211802g00002 | 516 | SMART | LRR_typ_2 | 133 | 157 | IPR003591 | - | |
Stsc211802g00002 | 516 | SUPERFAMILY | L domain-like | 6 | 268 | - | - | |
Stsc211802g00002 | 516 | ProSiteProfiles | Protein kinase domain profile. | 360 | 516 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211802g00002 | 516 | SUPERFAMILY | Protein kinase-like (PK-like) | 349 | 504 | IPR011009 | - | |
Stsc211802g00002 | 516 | SMART | serkin_6 | 360 | 514 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211802g00002 | 516 | Gene3D | Transferase(Phosphotransferase) domain 1 | 351 | 512 | - | - | |
Stsc211802g00002 | 516 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 2 | 505 | - | - | |
Stsc211802g00002 | 516 | ProSitePatterns | Protein kinases ATP-binding region signature. | 366 | 390 | IPR017441 | GO:0005524 | |
Stsc211802g00002 | 516 | Pfam | Protein kinase domain | 363 | 504 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211802g00002 | 516 | Pfam | Leucine rich repeat | 63 | 122 | IPR001611 | GO:0005515 | |
Stsc211802g00002 | 516 | FunFam | LRR receptor-like serine/threonine-protein kinase RCH1 | 1 | 277 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211802g00002 | Stsc-Chr211802 | 36346 | 40431 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211802g00002 | 2 | 504 | Receptor kinase-like Gene Family | AT5G56040 | 52.871 | 7.96e-170 | 506 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Stsc211802g00002 | Pkinase | 2.3e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211802g00002 | - | - | adu:107493731 | 909.442 |