Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211802g00001 | ATGGGTTTCTATGCTGAGGACTCATCATCAGCATATGGTTTGAAAATAGGTCAAGCCATATATGAAGCAGCTCTAATCATTGCAGTTGTGAGATGGGTCTTGTGCTTGGTTTCCAGGTTCATCAAAGATAGAAGCACGACACCTCCTTCTTCGTCTTCTTCTTGTACCCTTGTGTTGACCACGTTCCGTGAGATAATGGAGAGGCTTCCGGAGACAGAAGAAGATACATCTTGTGCGGTGTGCTTGAACCAGATGAAGATGGAAGATGAGGTTAGGGAACTCGTGAACTGCTACCATGTCTTCCACAGGGAATGCATAGACAGATGGTTGAACCATGATGATAACAACCATAACCCTACTTGCCCTCTTTGTAGAGCACCTTTGCTCACTCTTAGTGAGAGCTGTCATACATCTTCAGAGAGCTCTTATGGTTGTGTGCCTCCATCCCCTCAACCCAGTTGGGCTGTGGAGAGACTTCTCTACCTCTTCGGAGATGATCTCCTTCCATGTTAA | 513 | 0.46 | MGFYAEDSSSAYGLKIGQAIYEAALIIAVVRWVLCLVSRFIKDRSTTPPSSSSSCTLVLTTFREIMERLPETEEDTSCAVCLNQMKMEDEVRELVNCYHVFHRECIDRWLNHDDNNHNPTCPLCRAPLLTLSESCHTSSESSYGCVPPSPQPSWAVERLLYLFGDDLLPC | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211802g00001 | 170 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 25 | 168 | - | - | |
Stsc211802g00001 | 170 | SMART | ringv_2 | 77 | 125 | IPR011016 | GO:0008270 | |
Stsc211802g00001 | 170 | Pfam | Ring finger domain | 77 | 125 | IPR001841 | - | |
Stsc211802g00001 | 170 | SUPERFAMILY | RING/U-box | 72 | 131 | - | - | |
Stsc211802g00001 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 58 | 133 | IPR013083 | - | |
Stsc211802g00001 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 78 | 125 | IPR001841 | - | |
Stsc211802g00001 | 170 | SMART | ring_2 | 78 | 124 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211802g00001 | Stsc-Chr211802 | 6447 | 6959 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211802g00001 | 1 | 167 | C3H Transcription Factor Family | AT5G20885 | 46.237 | 1.03e-42 | 139 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211802g00001 | K16281 | - | gmx:111138523 | 219.935 |