Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211801g00002 ATGATGATGGAAACAAAGCAAGAAGGAATAACAGAAGAGAAGAACAATAACAACAATGAGAAAGACAAGTTTACCCTCAAAGGAGGAGCATCATCTTCAACATCAACAAGGCAATGGTCAGCATTCCGTAACCCGAGAATCGTGAGGGTATCAAGGTCATTTGGCGGTAAAGACAGACACAGCAAGGTTTGCACGATAAGAGGCCTTCGTGACCGTCGGATCAGGCTCTCCGTTCCCACCGCCATTCAATTGTACGATCTACAAGACAAGCTCGGACTCTCTCAGCCAAGCAAAGTCATCGATTGGCTTCTAGAAGCTACCAAGCTTGACATTGATAAGCTTCCCCCTCTTCACTTCCCTCTCCACCCCCAATTCCAAACCCTATTCCCTCACCACCTCCTCCACGACCCTTCCATTTCGATTTCCCCCTTGGCCGCTGCCGCCGCCTCCGCCGTCGACTCTCCCGCCTCTTCCAGGTTCCTTAAAGGCAAGGACTTGGTGATTTCTTCAAATTCCGATAACAAGGGGAACAAATGGATGTTCAAAAGTAATAACAACAACAACAATCAATTTGGAATTGGTAATGGTTATTACGGTTACGGTTATAACTGCTTGTCTTCCAGTACAACCACTCAGAGGCTTTTCCCAATGGGGAATGCCACAACAGCTAATAACAACCCTCTGCAGAGTTTGTTAAACTACAACAACTCCTCTTTCTCCGATGCTTCTAATTTCGGAAGCCAGGGATTGTCGTCGTCGTCTTCTGCTGCTTATTATCATCATCATCATCAAGGGGGAGATTATTACGGTGGCTATCCAATGATAAATAGTAATAATAGTGGGGGCTTGTTGCAATTTAATCATTTATCTTCTTTGCAAGTAGGCCCATCTGGTTCTTCCTCACAGTTATTGTTTGGTCCATTATCTTCTGCTGCTTCTGCTTCTGGTGGTGCTGCTACACAGCAGATTTTCACACCTTATGCACCATTTGTAACAAACCCAGCATCTGTCGTGGGAAGTAATAATAATAATAATAATAATGCTGGTGGTGATCAAATAAGACATCAATTCAATAGTCAAATTCATCAGTTCTTGAACTCATCCTCCTCATCTTCATCGTCGTCGTCTTCGTTGTCTTCGTCATCAAGCCTTTTCCATCATCATCATCATTCGTTGTTTAACTCATCACCTGTGAGACCCTTCCCTACACTACCCTTCAGTTCCAAGCTTCTAGATTCTTCTTCAGATCGCAATGGAGACCACCAACCAGATCATAATAACAATAAGGGTACTACTACTTCAGCTCGCTCTTGA 1314 0.4406 MMMETKQEGITEEKNNNNNEKDKFTLKGGASSSTSTRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKLDIDKLPPLHFPLHPQFQTLFPHHLLHDPSISISPLAAAAASAVDSPASSRFLKGKDLVISSNSDNKGNKWMFKSNNNNNNQFGIGNGYYGYGYNCLSSSTTTQRLFPMGNATTANNNPLQSLLNYNNSSFSDASNFGSQGLSSSSSAAYYHHHHQGGDYYGGYPMINSNNSGGLLQFNHLSSLQVGPSGSSSQLLFGPLSSAASASGGAATQQIFTPYAPFVTNPASVVGSNNNNNNNAGGDQIRHQFNSQIHQFLNSSSSSSSSSSSLSSSSSLFHHHHHSLFNSSPVRPFPTLPFSSKLLDSSSDRNGDHQPDHNNNKGTTTSARS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211801g00002 437 MobiDBLite consensus disorder prediction 1 37 - -
Stsc211801g00002 437 MobiDBLite consensus disorder prediction 1 21 - -
Stsc211801g00002 437 MobiDBLite consensus disorder prediction 404 437 - -
Stsc211801g00002 437 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 393 IPR005333 GO:0003700
Stsc211801g00002 437 MobiDBLite consensus disorder prediction 22 37 - -
Stsc211801g00002 437 Pfam TCP family transcription factor 56 119 IPR017887 -
Stsc211801g00002 437 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211801g00002 Stsc-Chr211801 13625 14938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211801g00002 30 130 TCP Transcription Factor Family AT5G08070 72.277 9.38e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc211801g00002 TCP 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211801g00002 - - ahf:112786937 457.218