Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211794g00007 ATGTGCCATTCTGGTGGTTACTCCCAAGTCCAGGATTCAATGGATGTTACTCCGAAACCACCTAATTCACAAGACAATATTGAAGACTGTGTGATGAATGGTGCGAAAGAGAACGTGAGTTGTACTTGTGATTGCGGCGGTAGTAGTAGCAAGTGTGCTTATGTGACTGCGGATGATATTAGGAATCAGACTTTTGAAACATCGGATGCAGCCTATAATTTGTATGTAAGCTACGCGAGGTGCGTTGGCTTTGGAGTTCGCAAGGGTGATGTGGCACGCGGAAAAGATGGGTCGCATCGTAGAAGACGGTTTTTTTTCAATAGGGAAGGAAAGAGACATGAGAAATTCATCTCCAATCCTGATAGGAAGAGGGAGCATAAAGCTCTGACTCGAACTGGTTGTGAAGCCTTGCTTTCGATATACTTTGACACTAAATCTTCAATTTGGAGGGTAAGAAAATTAGTTGAGGAGCACAACCATGATCTAGTCCCTCAATGTTTGGTACATCTCATTCCAAGTCATCGAGGAATGACCAAGGCTAAAAAAGCACAGGCTAACGCCAGGCATGATAATGGCCTCCCAACTTCTAAAATAATGGGACTAATGGTAGGACAAGCAGGTGGTTATGATAACATCAGATTCACAAAGAAGGACTTGGATAACCACATTGGAAGATTGCGACGTGCAAAGCTCCTTGGTGGGGATGCTAATGCAACAATAAGCTATCTACTTGGGAAGGCAGATGTTGATCCCATGGCCATGGCAAAGTATAGTCCTACTAGCGAAAATCGGCTAGCAAACTTGTTTTGGGCAGATGAAATTTCTAGGGCCGATTATCAGTGCTTTGGAGATGTGCTCGCATTCGATACGACTTATCGAAAAAATAAGTACAGGAAGCCGTTGGTAATTTTCTCAGGTTGTAATCATCACTGCCAGACATGCATATTTGGCTTTGCCTTGGTGCAGGATGAAACAACAGCAACATATACCTGGTTGTTGGAGAACTTTATGAAAGTAATGTTGAACAAGTCTCCTAATGTTATGGTCACAGATGGCGATGAGGCAATGAAGGTTGCAATTCGTGCAGTCTTCCCAAATGCATCTCACCGATTATGTGGTTGGCATATTCAAAAATATGTCACAACAAACATTAAAAATAAATCTTTTGCCGAAGATTTCAGAAAAATGTTTGTACGTTACATGGCATCCGGATGA 1215 0.4239 MCHSGGYSQVQDSMDVTPKPPNSQDNIEDCVMNGAKENVSCTCDCGGSSSKCAYVTADDIRNQTFETSDAAYNLYVSYARCVGFGVRKGDVARGKDGSHRRRRFFFNREGKRHEKFISNPDRKREHKALTRTGCEALLSIYFDTKSSIWRVRKLVEEHNHDLVPQCLVHLIPSHRGMTKAKKAQANARHDNGLPTSKIMGLMVGQAGGYDNIRFTKKDLDNHIGRLRRAKLLGGDANATISYLLGKADVDPMAMAKYSPTSENRLANLFWADEISRADYQCFGDVLAFDTTYRKNKYRKPLVIFSGCNHHCQTCIFGFALVQDETTATYTWLLENFMKVMLNKSPNVMVTDGDEAMKVAIRAVFPNASHRLCGWHIQKYVTTNIKNKSFAEDFRKMFVRYMASG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211794g00007 404 PANTHER OS01G0519700 PROTEIN 60 396 - -
Stsc211794g00007 404 MobiDBLite consensus disorder prediction 1 25 - -
Stsc211794g00007 404 Pfam MULE transposase domain 285 378 IPR018289 -
Stsc211794g00007 404 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211794g00007 Stsc-Chr211794 32699 36196 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc211794g00007 MULE 2.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211794g00007 - - ahf:112715498 637.106