Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211786g00008 ATGCCACCAGGTCCTTACCCTTATCCTATAATAGGAAATATCTTAGAACTTGGCCAAAATCCCCATCAATCACTCTTTAACCTATCAAAAATTTATGGTCCCCTAATGACCCTTAAGCTTGGAAGCTTGAATGCTATAATCATTTCATCACCAGATATAGCCAAAGAAGCATTAACCAAACATGACTTAGCATTTTCCAATAGGCAAGTCCCTGATGCCATAAGGGTACTTGGCCACCACAAAGTTTCTTTAGTGTGGTCTCCAATTTGTGATCATTGGAGAACACTAAGGAAATTATGTTCTACAAACATATTTTCCCCTCAGAAGCTTGAATCAACTAGCAAACTTCGCCACGAGAAGGTCGAAGAGTTGGTGAATTTTGTGAGGACTCGCTCTACAAATGGCGAGGCTATTGATGTTGGTAAGGTTGTGTTCACTACAATAATGAATTCATTTTCCAACACCCTTTTCTCCATGGATTTTGCTCAATTTGGAGATGGTGACGCGGACAATGGATTTCAAAATTTTAAAGCGACTATAGAGTCGTTAATGATAGATTTTGGGAAGGCAAATGTGTCGGATCTTTTCCCTCTTCTTCGTTTCCTTGATCCACAAGGTATTCGAAAAAGAGGAAAGGATGTTATTAAGAGGTTGTTGATAGTTTTTGGTGATATTTTCGATGAAAGGATACAATTGAAAACTTCATCCAAAGAAGCTTACGATGATGTATTAGATTATTTCATTAATATCATCAAAGTAAACAGTTCGGCAGAATTAAGTCGTCATCTTTTACTACATTTGTTTGTGGACTTATTTGTTGCTGGGATAGAAACAACAACAAGCACAATAGAATGGGCAATGACAGAATTGGTTCACAACCCTAAAAAGAGGGCTAGAGTCAAAGAGGAGCTCCTACAAGTCCTTGGCAAAGATGGCAAGCCACATGAATCAAACATCTCAGAATTTCATTACTTAAACGCAATTGTGAAGGAAACATTTCGGTTGCACCCACCAGTTCCCTTTTTACACCACAAATCAAACTCTATGGTAGAGTTATGTGGCTTCAAAGTTCCAAAGGACACACAAGTTCTAATAAACTTATGGGCCATTGGAAGAAATTCTAGCACATGGAGTGACCCAAATTCATTTGTTCCGGAAAGGTTCTTAGAGTGCAAAATGGATGTTAAGGGTTTTGATTTTGAGCTGATTCCGTTTGGGGCTGGAAGAAGAATGTGTCCAGCACTTCCACTTGCTCATAGAACAGTGCATTTCATTTTGGCCTCTCTTTTGCACCATTTTGATTGGAAGATTGTTGATGGAATGAAGCCTCAAGAATTAGACATGAGTGAGAAGTATGGACTCACTATACGAAAGGCTCAACCACTCAAACTCATTCCAATCCATACCAATTATTGTCAATGA 1422 0.3868 MPPGPYPYPIIGNILELGQNPHQSLFNLSKIYGPLMTLKLGSLNAIIISSPDIAKEALTKHDLAFSNRQVPDAIRVLGHHKVSLVWSPICDHWRTLRKLCSTNIFSPQKLESTSKLRHEKVEELVNFVRTRSTNGEAIDVGKVVFTTIMNSFSNTLFSMDFAQFGDGDADNGFQNFKATIESLMIDFGKANVSDLFPLLRFLDPQGIRKRGKDVIKRLLIVFGDIFDERIQLKTSSKEAYDDVLDYFINIIKVNSSAELSRHLLLHLFVDLFVAGIETTTSTIEWAMTELVHNPKKRARVKEELLQVLGKDGKPHESNISEFHYLNAIVKETFRLHPPVPFLHHKSNSMVELCGFKVPKDTQVLINLWAIGRNSSTWSDPNSFVPERFLECKMDVKGFDFELIPFGAGRRMCPALPLAHRTVHFILASLLHHFDWKIVDGMKPQELDMSEKYGLTIRKAQPLKLIPIHTNYCQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211786g00008 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Stsc211786g00008 473 Pfam Cytochrome P450 2 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 Gene3D Cytochrome P450 1 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS E-class P450 group I signature 53 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS E-class P450 group I signature 326 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS E-class P450 group I signature 366 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS P450 superfamily signature 327 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 SUPERFAMILY Cytochrome P450 2 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00008 473 CDD CYP76-like 29 466 - -
Stsc211786g00008 473 FunFam Cytochrome P450 76C4 1 465 - -
Stsc211786g00008 473 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211786g00008 Stsc-Chr211786 38077 39604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211786g00008 1 467 Cytochrome P450 AT2G45550 46.512 7.95e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211786g00008 - - aprc:113851120 595.504