Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211786g00007 ATGCCACCAGGTCCATACCCTTATCCCATAATAGGAAACATCTTAGAACTTGGCCACAAACCCTATGAATCACTCTTCCACCTTTCCAAAAAACATGGCCCTATAATGACTCTCAAGTTTGGAAGCTTAACCTCCATTGTTATCTCTTCACCAGAGATAGCCAAAGAAGCATTAACCAAACATGACTTAGCATTTTCCAATAGGCAAGTCCTTGATATCACCAGGGCACTTGATCACCACAGAGTGTCTATGGTGTGGTCACCCGTATGTGATCATTGGAGAACACTAAGGAAACTATGTTCCACACACATATTCTCCCCTCAAAAGCTTGAATCAACTAGCAAACTTCGCCACAAGAAGGTTCAAGAATTGGTGAACTTTGTTGGAACATGGTGTTCCAAAGGTAGTAGTGATGAAGAAGAAGCTATTGATATTGGTAAGGTTGTGTTCATAACAATCATGAATTCATTGTCCAATACCCTTTTCTCTATGGATTTTGCACATTATTATGGAGGCGCTAGTGATGATGAAATTCAACATGATTTCAAGGAGATTATAGAGGGAATATTGGATGATGCTGGACAGATTAACTTGGTTGATCTCTTTCCGGTTCTTGGTTTTCTTGATCCACAAGGCCTAAGAGGAAGGTGTGAAGACTCTTTTAAGAGGCTATTGGAGCTTTTTGATGATATCTTTGATGAAAGAGTTCGGATGAAAGCATCTTCTGAAAAAGGTTTTGAGAGAACTACATGCTGTGATGTGCTAGATTCTTTTTTGGATCTTCTCAAAGAAAATAATTCTCAAGATCTGAATCGTCATTGTTTGTTACACTTATTTCTGGACTTATTTATTGCTGGATTAGAGACAACAACAAGCACAGTAGAATGGGCAATGGCAGAGTTAATGCATAACCCTAACGAAATGAAGAAAGCCAAAGAAGAGCTTTTACAAATCCTTGGTAGAGATGAAAACCCTAAAGAATCAGACATATCAAAGTTACATTACTTGGAAGCAATTATAAAGGAAACACTTCGGTTGCACTCTCCAATTCCCATTTTATTCCACAAATCAAAGTTCGATGTAGAAATCAATGGCTTCAAAGTTCCCAAAGATGCAGAGGTTTTAGTTAATTTATGGGCCATAGGAAGAGATTCAAGTATTTGGAGTGATCCAAATTCTTTTGTGCCAGAAAGGTTTCAAGAATGCAAAATGGACACTAATAATAAGGGTAACAACAATTTTGAGTTCATTCCCTTTGGAAGTGGAAGAAGAATGTGTCCTGCAATTTCATTGGTACATAGAATAGTACCTTTGATTTTAGCCACACTTTTGCATTGTTTTGATTGGAAGATTGTGGATGACAAGAAACCTCAAGAATTAGACATGAGTGAAGAATATGGTCTTACTGTACGTAGGGCTCAACCACTTCTACTCGTTCCAATTATTCAAACCGATTAA 1458 0.3779 MPPGPYPYPIIGNILELGHKPYESLFHLSKKHGPIMTLKFGSLTSIVISSPEIAKEALTKHDLAFSNRQVLDITRALDHHRVSMVWSPVCDHWRTLRKLCSTHIFSPQKLESTSKLRHKKVQELVNFVGTWCSKGSSDEEEAIDIGKVVFITIMNSLSNTLFSMDFAHYYGGASDDEIQHDFKEIIEGILDDAGQINLVDLFPVLGFLDPQGLRGRCEDSFKRLLELFDDIFDERVRMKASSEKGFERTTCCDVLDSFLDLLKENNSQDLNRHCLLHLFLDLFIAGLETTTSTVEWAMAELMHNPNEMKKAKEELLQILGRDENPKESDISKLHYLEAIIKETLRLHSPIPILFHKSKFDVEINGFKVPKDAEVLVNLWAIGRDSSIWSDPNSFVPERFQECKMDTNNKGNNNFEFIPFGSGRRMCPAISLVHRIVPLILATLLHCFDWKIVDDKKPQELDMSEEYGLTVRRAQPLLLVPIIQTD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211786g00007 485 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS E-class P450 group I signature 53 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 FunFam Cytochrome P450 76C4 1 479 - -
Stsc211786g00007 485 Pfam Cytochrome P450 2 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 SUPERFAMILY Cytochrome P450 2 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 481 - -
Stsc211786g00007 485 CDD CYP76-like 29 480 - -
Stsc211786g00007 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Stsc211786g00007 485 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00007 485 Gene3D Cytochrome P450 1 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211786g00007 Stsc-Chr211786 30468 33142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211786g00007 1 481 Cytochrome P450 AT2G45550 43.271 2.17e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211786g00007 - - adu:107475807 723.391