Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211786g00005 ATGATCAAATCCTCTCTAATAGAACAGTCCCGGATACAATTAAAGCACTTGATCACCACATATTTTCAATGGTATGGATGCCACCTACAAATCAATGGAGGATTCTTAGGAGAGTTAGTGCTAACAAAGTGTTCTCGCCCCAACAACTTGATTCTACATGATCATCACAATAATTCTAAAAAGTCACAAGAGTTCAAGGAGATATTTTTGGGCATTATGAAAGAAGCTGGAAGGCCTAATGTTGTGGACTTTTTTCCAATGCTTCGCAAGCTTGATCCACAAGGTGCACGTGCAAGGATGAACAATTACTTTGGGAAGTTGATTGATTTTTTTGATGGTCTTGTTGAAGAAAGGTTAGAAAGGGAAACGAAATTATCTACTGATGTGTTGGATTCTTTGTTGGAATTTATGATGGAAGACAACTCCCAAGTTACTCGTCCTCATCTATTGCATTTATTTTTGGATTTATTTGTAGCTGGAACAGACACAACATCAAGTACAATAGAATGGGCAATGTCAGAATTGTTACGCAACCCTGAAAAACTAGAACAAGTAAGAAAAGAGCTTCAACAAGTTATTGGCAAAGATGAACAAGAACAAATTGAAGAATCATATATCACAAAACTTCCTTACCTAAGAGCAGTGGTGAAAGAAACTTTTAGGTTGCACCCACCAATCCCACTTTTAGTGCCACACAAATCAGAAGACAATGTTGAAATATGTGGTTTCATGGTACCTAAAGATGCACAAGTTCTTGTTAATGTTTGGGCTATGGGAAGAGATTCAAATATTTGGAGAAACCCAGATGAATTTTTACCTGAAAGATTCTTAGAAAATGATGTTGATTTTAAGGGCCAAGATTTTGAGTTAATTCCGTTTGGTGCTGGAAGAAGAATTTGTCCTGGATTACCATTGGCTTCTAGAACCATCCACATTGTTTTAGCATCTCTTCTATATAACTATGATTGGAAGCTTGCAAATGGAAAAAAGAAAGAGGACATTGACATGTCTGAGACATACGGGATTACCCTACATAAGACTCATCCTCTCCATGTTATATCAATCCAAGCATAA 1074 0.3678 MIKSSLIEQSRIQLKHLITTYFQWYGCHLQINGGFLGELVLTKCSRPNNLILHDHHNNSKKSQEFKEIFLGIMKEAGRPNVVDFFPMLRKLDPQGARARMNNYFGKLIDFFDGLVEERLERETKLSTDVLDSLLEFMMEDNSQVTRPHLLHLFLDLFVAGTDTTSSTIEWAMSELLRNPEKLEQVRKELQQVIGKDEQEQIEESYITKLPYLRAVVKETFRLHPPIPLLVPHKSEDNVEICGFMVPKDAQVLVNVWAMGRDSNIWRNPDEFLPERFLENDVDFKGQDFELIPFGAGRRICPGLPLASRTIHIVLASLLYNYDWKLANGKKKEDIDMSETYGITLHKTHPLHVISIQA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211786g00005 357 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 293 302 IPR017972 GO:0005506|GO:0016705
Stsc211786g00005 357 FunFam Geraniol 8-hydroxylase 91 353 - -
Stsc211786g00005 357 Gene3D Cytochrome P450 49 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 Pfam Cytochrome P450 57 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PRINTS E-class P450 group I signature 1 10 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PRINTS E-class P450 group I signature 300 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PRINTS E-class P450 group I signature 290 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PRINTS E-class P450 group I signature 254 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 56 356 - -
Stsc211786g00005 357 PRINTS P450 superfamily signature 159 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PRINTS P450 superfamily signature 214 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PRINTS P450 superfamily signature 291 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 PRINTS P450 superfamily signature 300 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00005 357 SUPERFAMILY Cytochrome P450 58 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211786g00005 Stsc-Chr211786 20105 22297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211786g00005 58 350 Cytochrome P450 AT1G33730 52.667 3.44e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211786g00005 - - gmx:100809483 476.863